Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1318 Fragaria x ananassa HOM05D007040 ORTHO05D017016 3.1e-184 648.3 316 100.0
FAN07G2054 Fragaria x ananassa HOM05D007040 ORTHO05D017016 8.2e-169 597.0 353 84.1
FAN05G3694 Fragaria x ananassa HOM05D007040 ORTHO05D017016 4.5e-127 458.4 353 70.3
FAN05G0243 Fragaria x ananassa HOM05D007040 ORTHO05D017016 1.3e-126 456.8 353 70.0
FvH4_4g02210 Fragaria vesca HOM05D007040 ORTHO05D017016 6.6e-102 374.8 323 65.0
FvH4_1g25700 Fragaria vesca HOM05D007040 ORTHO05D017016 1.4e-96 357.1 252 74.2
FAN17G1088 Fragaria x ananassa HOM05D007040 ORTHO05D017016 8.6e-94 347.8 315 62.5
RcHm_v2.0_Chr5g0047301 Rosa chinensis HOM05D007040 ORTHO05D017016 1.3e-57 227.6 207 57.0
FAN14G1747 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.6e-34 150.2 335 32.8
FAN21G2590 Fragaria x ananassa HOM05D007040 ORTHO05D001602 6.5e-33 145.6 332 31.9
FAN05G2524 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.1e-27 126.7 324 29.9
FAN15G1458 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.1e-27 126.7 324 29.3
FvH4_4g14564 Fragaria vesca HOM05D007040 ORTHO05D017016 5.3e-27 125.9 233 38.2
FvH4_6g24041 Fragaria vesca HOM05D007040 ORTHO05D001602 1.5e-24 117.9 174 40.2
FAN02G0486 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.5e-24 117.9 215 35.8
FAN02G4542 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.5e-24 117.9 333 28.2
FAN27G3262 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.2e-24 116.7 332 28.6
FAN08G1044 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.6e-23 113.2 240 32.9
FAN26G0720 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.4e-22 111.3 210 34.8
FAN23G1065 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.0e-22 109.8 348 27.0
FAN23G0019 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.4e-21 106.7 187 35.3
FAN23G1647 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.1e-19 100.1 350 26.9
FAN23G0445 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.4e-19 99.4 89 51.7
FAN17G2479 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-18 98.2 323 27.9
FAN20G2118 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-18 98.2 90 50.0
FAN28G0487 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.5e-16 89.4 83 49.4
FAN23G0411 Fragaria x ananassa HOM05D007040 ORTHO05D001602 6.1e-15 85.9 300 27.7
FAN26G1067 Fragaria x ananassa HOM05D002010 ORTHO05D001602 1.4e-14 84.7 95 42.1
FAN09G3473 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.2e-14 82.8 90 43.3
FAN04G2361 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.5e-13 81.3 311 26.0
FAN05G5575 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.4e-13 79.7 317 25.9
Dinv02873 Davidia involucrata HOM05D002010 ORTHO05D001602 5.7e-13 79.3 219 28.3
Rhsim02G0154000 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.7e-13 79.3 179 33.0
FAN03G1439 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.8e-13 78.6 327 27.2
Dinv38391 Davidia involucrata HOM05D002010 ORTHO05D001602 4.9e-12 76.3 82 45.1
FAN03G2120 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.9e-12 76.3 340 25.9
Rhsim02G0170800 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.4e-11 74.7 124 37.1
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.4e-11 74.7 124 37.1
Dinv06784 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-11 74.3 82 42.7
TAR325G0001 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.8e-11 74.3 82 45.1
Dinv05229 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-11 73.9 94 41.5
Dinv13093 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-11 73.9 82 42.7
Dinv24716 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-11 73.9 82 42.7
Rhsim04G0055800 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-11 73.9 97 41.2
Rhsim06G0043900 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-11 73.9 97 41.2
Rhsim08G0147800 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-11 73.9 97 41.2
Rhsim13G0205100 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-11 73.9 97 41.2
RhsimUnG0008800 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.4e-11 73.9 97 41.2
Dinv25862 Davidia involucrata HOM05D002010 ORTHO05D001602 3.1e-11 73.6 82 42.7
Dinv24136 Davidia involucrata HOM05D002010 ORTHO05D001602 4.1e-11 73.2 96 38.5
Dinv37125 Davidia involucrata HOM05D002010 ORTHO05D001602 4.1e-11 73.2 96 38.5
Dinv00203 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 94 39.4
Dinv00969 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 82 41.5
Dinv04682 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 82 41.5
Dinv06823 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 97 39.2
Dinv08992 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 94 39.4
Dinv10756 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 82 41.5
Dinv12198 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 94 39.4
Dinv15902 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-11 72.8 93 39.8
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 7.0e-11 72.4 94 39.4
Dinv21511 Davidia involucrata HOM05D002010 ORTHO05D001602 7.0e-11 72.4 82 41.5
Dinv40634 Davidia involucrata HOM05D002010 ORTHO05D001602 9.1e-11 72.0 72 51.4
Rhsim01G0118200 Rhododendron simsii HOM05D008460 ORTHO05D001602 9.1e-11 72.0 97 40.2
TAR625G0747 Trochodendron aralioides HOM05D002010 ORTHO05D001602 9.1e-11 72.0 82 43.9
Dinv13534 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-10 71.6 94 38.3
Dinv13642 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-10 71.6 82 42.7
Dinv34720 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-10 71.6 82 43.9
Rhsim12G0101900 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.2e-10 71.6 97 39.2
Dinv39029 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-10 71.2 82 40.2
RhsimUnG0116700 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.6e-10 71.2 97 39.2
Dinv03884 Davidia involucrata HOM05D002010 ORTHO05D001602 2.0e-10 70.9 82 41.5
Dinv24135 Davidia involucrata HOM05D002010 ORTHO05D001602 2.0e-10 70.9 94 38.3
Rhsim06G0133000 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.0e-10 70.9 97 39.2
Dinv30309 Davidia involucrata HOM05D002010 ORTHO05D001602 2.7e-10 70.5 82 42.7
Dinv19302 Davidia involucrata HOM05D002010 ORTHO05D001602 3.5e-10 70.1 96 40.6
FAN05G4005 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.5e-10 70.1 200 30.0
FAN24G1646 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.5e-10 70.1 62 50.0
Dinv07285 Davidia involucrata HOM05D002010 ORTHO05D001602 4.5e-10 69.7 93 40.9
Dinv12540 Davidia involucrata HOM05D002010 ORTHO05D001602 4.5e-10 69.7 82 41.5
Dinv36416 Davidia involucrata HOM05D002010 ORTHO05D001602 4.5e-10 69.7 82 40.2
Dinv00799 Davidia involucrata HOM05D002010 ORTHO05D001602 5.9e-10 69.3 113 37.2
Dinv08300 Davidia involucrata HOM05D002010 ORTHO05D001602 5.9e-10 69.3 95 36.8
TAR627G0184 Trochodendron aralioides HOM05D002010 ORTHO05D001602 5.9e-10 69.3 79 45.6
Dinv10942 Davidia involucrata HOM05D002010 ORTHO05D001602 1.0e-09 68.6 93 38.7
FvH4_2g14880 Fragaria vesca HOM05D007040 ORTHO05D012106 1.0e-09 68.6 94 38.3
FAN16G2256 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-09 68.6 63 47.6
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 1.0e-09 68.6 81 40.7
Thecc.06G166400 Theobroma cacao HOM05D002010 ORTHO05D001602 1.0e-09 68.6 127 30.7
CSS0043466 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.7e-09 67.8 257 24.1
Dinv09159 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-09 67.8 94 40.4
Dinv11378 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-09 67.8 62 46.8
Dinv20775 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-09 67.8 82 39.0
Dinv27623 Davidia involucrata HOM05D002010 ORTHO05D001602 1.7e-09 67.8 82 39.0
Dinv17738 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-09 67.4 62 46.8
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.9e-09 67.0 257 24.1
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.9e-09 67.0 257 24.1
TAR381G1537 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.9e-09 67.0 82 41.5
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.8e-09 66.6 257 24.1
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.8e-09 66.6 257 24.1
Dinv09238 Davidia involucrata HOM05D002010 ORTHO05D001602 3.8e-09 66.6 82 39.0
Dinv26201 Davidia involucrata HOM05D002010 ORTHO05D001602 3.8e-09 66.6 94 37.2
Rhsim02G0158500 Rhododendron simsii HOM05D008460 ORTHO05D001602 3.8e-09 66.6 97 37.1
TAR376G1214 Trochodendron aralioides HOM05D002010 ORTHO05D001602 3.8e-09 66.6 82 40.2
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 5.0e-09 66.2 222 27.9
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 5.0e-09 66.2 257 24.1
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.6e-09 65.9 257 24.1
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.6e-09 65.9 257 24.1
Dinv09903 Davidia involucrata HOM05D002010 ORTHO05D001602 1.1e-08 65.1 94 38.3
Dinv33750 Davidia involucrata HOM05D002010 ORTHO05D001602 1.1e-08 65.1 100 35.0
COL.COLO4_37662 Corchorus olitorius HOM05D015334 ORTHO05D001602 1.9e-08 64.3 77 42.9
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.5e-08 63.9 211 25.1
Dinv04569 Davidia involucrata HOM05D002010 ORTHO05D001602 4.2e-08 63.2 82 40.2
Dinv17992 Davidia involucrata HOM05D002010 ORTHO05D001602 4.2e-08 63.2 77 40.3
Dinv29069 Davidia involucrata HOM05D002010 ORTHO05D001602 4.2e-08 63.2 65 41.5
RhsimUnG0009600 Rhododendron simsii HOM05D008460 ORTHO05D001602 4.2e-08 63.2 173 31.2
Rhsim05G0166200 Rhododendron simsii HOM05D002010 ORTHO05D014675 5.6e-08 62.8 251 27.1
Dinv18042 Davidia involucrata HOM05D002010 ORTHO05D001602 7.2e-08 62.4 82 39.0
FvH4_2g11190 Fragaria vesca HOM05D007040 ORTHO05D001602 7.2e-08 62.4 159 30.2
TAR624G0271 Trochodendron aralioides HOM05D002010 ORTHO05D001602 7.2e-08 62.4 78 43.6
vmacro08925 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 7.2e-08 62.4 89 33.7
Dinv10265 Davidia involucrata HOM05D002010 ORTHO05D001602 9.5e-08 62.0 62 46.8
vmacro14347 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 9.5e-08 62.0 88 34.1
FAN24G2329 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-07 61.6 59 47.5
TAR381G1483 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.2e-07 61.6 91 35.2
Rhsim11G0005100 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.6e-07 61.2 93 37.6
Dinv24100 Davidia involucrata HOM05D002010 ORTHO05D001602 2.1e-07 60.8 94 33.0
FAN27G2232 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.8e-07 60.5 59 45.8
Nitab4.5_0000117g0090 Nicotiana tabacum HOM05D001371 ORTHO05D001319 3.6e-07 60.1 268 23.1
Dinv34094 Davidia involucrata HOM05D002010 ORTHO05D001602 4.7e-07 59.7 261 26.1
Nitab4.5_0005508g0030 Nicotiana tabacum HOM05D001371 ORTHO05D001319 4.7e-07 59.7 267 24.3
PSO782G1237 Papaver somniferum HOM05D002010 ORTHO05D001602 4.7e-07 59.7 293 25.9
Dinv18128 Davidia involucrata HOM05D002010 ORTHO05D001602 6.1e-07 59.3 62 45.2
Rhsim10G0117000 Rhododendron simsii HOM05D002010 ORTHO05D001602 6.1e-07 59.3 95 35.8
CANSAT80G2073 Cannabis sativa HOM05D002010 ORTHO05D001602 1.0e-06 58.5 83 36.1
Dinv04298 Davidia involucrata HOM05D002010 ORTHO05D001602 1.0e-06 58.5 62 50.0
PSO478G3183 Papaver somniferum HOM05D002010 ORTHO05D001602 1.0e-06 58.5 85 36.5
FAN13G0440 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.8e-06 57.8 59 42.4
Dinv16803 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-06 57.4 95 32.6
FAN28G1047 Fragaria x ananassa HOM05D007040 ORTHO05D025383 2.3e-06 57.4 184 27.2
Lj8C168T12 Lonicera japonica HOM05D001371 ORTHO05D001319 2.3e-06 57.4 98 31.6
TAR325G0002 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.3e-06 57.4 82 37.8
COL.COLO4_32856 Corchorus olitorius HOM05D002010 ORTHO05D001602 3.0e-06 57.0 82 34.1
PSO782G1846 Papaver somniferum HOM05D002010 ORTHO05D001602 3.0e-06 57.0 83 37.3
Rhsim01G0106400 Rhododendron simsii HOM05D002010 ORTHO05D001602 3.0e-06 57.0 95 33.7
Rhsim02G0152100 Rhododendron simsii HOM05D002010 ORTHO05D014675 3.0e-06 57.0 89 36.0
Rhsim04G0153800 Rhododendron simsii HOM05D002010 ORTHO05D001602 3.0e-06 57.0 95 33.7
Rhsim10G0096700 Rhododendron simsii HOM05D002010 ORTHO05D014675 3.0e-06 57.0 95 33.7
Dinv26405 Davidia involucrata HOM05D002010 ORTHO05D001602 6.8e-06 55.8 82 37.8
PSO339G4914 Papaver somniferum HOM05D002010 ORTHO05D001602 6.8e-06 55.8 95 34.7
TAR627G0107 Trochodendron aralioides HOM05D002010 ORTHO05D001602 6.8e-06 55.8 67 41.8
AT4G16050 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 8.9e-06 55.5 270 24.1
Dinv00973 Davidia involucrata HOM05D012236 ORTHO05D001602 8.9e-06 55.5 76 31.6
Dinv07197 Davidia involucrata HOM05D002010 ORTHO05D001602 8.9e-06 55.5 63 39.7
Dinv27102 Davidia involucrata HOM05D002010 ORTHO05D001602 8.9e-06 55.5 82 37.8
PSO541G5229 Papaver somniferum HOM05D002010 ORTHO05D001602 8.9e-06 55.5 83 37.3
RhsimUnG0112000 Rhododendron simsii HOM05D002010 ORTHO05D001602 8.9e-06 55.5 95 32.6


User provided reference genes

Program Settings