Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 8.7e-63 243.8 118 100.0
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 8.1e-61 237.3 118 97.5
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 1.8e-60 236.1 118 96.6
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.8e-60 236.1 118 97.5
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 1.0e-47 193.7 117 82.9
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 6.0e-40 167.9 114 71.1
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 1.9e-33 146.4 118 66.1
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 5.7e-30 134.8 117 59.0
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 7.4e-30 134.4 113 58.4
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 9.7e-30 134.0 114 57.9
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 2.8e-29 132.5 116 56.0
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 3.7e-29 132.1 113 57.5
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 3.7e-29 132.1 111 57.7
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 2.4e-28 129.4 120 57.5
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 9.1e-28 127.5 117 54.7
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.2e-27 127.1 117 51.3
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.0e-27 126.3 128 55.5
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 2.0e-27 126.3 106 59.4
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 2.6e-27 125.9 117 53.0
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 2.6e-27 125.9 114 58.8
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 3.4e-27 125.6 111 51.4
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.3e-26 123.6 110 52.7
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 1.3e-26 123.6 123 57.7
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 8.5e-26 120.9 115 53.0
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.4e-25 120.2 115 53.9
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.5e-25 119.4 125 54.4
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.5e-25 119.4 126 57.9
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 2.5e-25 119.4 122 48.4
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.2e-25 119.0 125 54.4
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 5.5e-25 118.2 125 55.2
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 5.5e-25 118.2 126 57.9
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 7.2e-25 117.9 114 54.4
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 1.2e-24 117.1 79 65.8
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.2e-24 117.1 126 57.1
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.6e-24 116.7 125 52.8
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 2.1e-24 116.3 118 50.8
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.7e-24 115.9 126 56.3
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.7e-24 115.9 126 56.3
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.7e-24 115.9 125 56.0
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.6e-24 115.5 126 56.3
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 6.1e-24 114.8 122 50.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 1.8e-23 113.2 115 50.4
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 3.0e-23 112.5 116 51.7
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 6.7e-23 111.3 116 50.0
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 8.8e-23 110.9 79 65.8
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 8.8e-23 110.9 121 47.9
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 8.8e-23 110.9 120 50.0
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 1.1e-22 110.5 126 48.4
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.5e-22 110.2 112 54.5
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 2.0e-22 109.8 86 61.6
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.0e-22 109.8 114 50.9
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 2.6e-22 109.4 114 50.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 4.4e-22 108.6 101 47.5
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 4.4e-22 108.6 109 56.0
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 4.4e-22 108.6 110 50.0
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 4.4e-22 108.6 124 46.0
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 4.4e-22 108.6 117 46.2
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 5.7e-22 108.2 118 49.2
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 7.4e-22 107.8 123 44.7
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 7.4e-22 107.8 123 44.7
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.3e-21 107.1 123 46.3
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 2.2e-21 106.3 128 50.0
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 2.8e-21 105.9 125 52.8
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 3.7e-21 105.5 123 43.9
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.7e-21 105.5 113 50.4
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 4.8e-21 105.1 123 45.5
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 6.3e-21 104.8 115 51.3
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 8.2e-21 104.4 115 51.3
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 8.2e-21 104.4 123 44.7
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.3e-20 101.7 125 48.8
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.2e-19 100.5 118 53.4
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 2.0e-19 99.8 122 45.9
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 2.0e-19 99.8 122 45.9
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 2.0e-19 99.8 109 49.5
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 2.6e-19 99.4 108 49.1
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 7.7e-19 97.8 75 62.7
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 7.7e-19 97.8 109 45.9
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 7.7e-19 97.8 109 45.0
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.0e-18 97.4 122 44.3
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.0e-18 97.4 122 44.3
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.0e-18 97.4 122 44.3
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 1.0e-18 97.4 92 51.1
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.3e-18 97.1 114 49.1
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.9e-18 95.9 83 57.8
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 3.8e-18 95.5 123 42.3
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 3.8e-18 95.5 113 42.5
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 1.1e-17 94.0 120 45.0
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.1e-17 94.0 122 42.6
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.4e-17 93.6 123 41.5
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 2.5e-17 92.8 115 40.0
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.6e-16 90.1 68 58.8
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 2.1e-16 89.7 124 40.3
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 2.1e-16 89.7 116 44.8
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 2.3e-15 86.3 119 42.0
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.9e-15 85.5 115 40.0
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 8.8e-15 84.3 115 38.3
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 9.7e-14 80.9 85 44.7
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 1.7e-13 80.1 121 41.3
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 1.4e-12 77.0 112 38.4
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 4.1e-12 75.5 95 43.2
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 6.1e-08 61.6 63 42.9
Haze_06834 Corylus avellana HOM05D002014 ORTHO05D001958 7.5e-06 54.7 114 29.8


User provided reference genes

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