Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.5e-136 487.6 249 100.0
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.2e-130 469.9 249 96.8
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 3.5e-130 468.4 249 96.4
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.2e-127 459.9 249 95.2
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.0e-123 444.1 254 90.6
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 4.1e-115 418.3 249 86.7
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.2e-85 320.5 260 68.8
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.9e-67 260.0 227 65.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.5e-66 255.8 204 67.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.6e-66 255.4 237 59.5
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 4.6e-66 255.4 229 62.0
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 6.0e-66 255.0 265 58.1
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 6.0e-66 255.0 237 62.0
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 7.8e-66 254.6 254 57.1
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 2.3e-65 253.1 221 61.5
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 6.6e-65 251.5 210 64.8
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.1e-64 250.8 265 57.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.9e-64 250.0 203 64.5
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 7.3e-64 248.1 207 64.3
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 4.8e-63 245.4 238 55.9
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.4e-62 243.8 233 62.2
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 2.4e-62 243.0 249 57.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 5.3e-62 241.9 238 57.6
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 5.3e-62 241.9 253 56.1
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.0e-61 240.0 177 68.4
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 2.6e-61 239.6 259 54.8
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 2.6e-61 239.6 222 58.6
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 3.4e-61 239.2 208 63.9
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 7.6e-61 238.0 242 55.8
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 9.9e-61 237.7 251 53.8
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.3e-60 237.3 222 59.0
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 3.8e-60 235.7 222 59.0
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.1e-59 234.2 222 58.1
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.4e-59 233.8 276 52.5
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.2e-59 232.6 222 58.6
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 2.7e-58 229.6 259 53.3
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 4.6e-58 228.8 222 56.3
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.0e-57 227.6 266 50.8
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 2.3e-57 226.5 195 62.6
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.3e-57 226.5 191 60.2
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 3.0e-57 226.1 201 58.7
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 3.9e-57 225.7 241 54.8
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 6.7e-57 224.9 191 59.7
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.1e-56 224.2 234 54.7
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.1e-56 224.2 209 56.9
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.5e-56 223.8 222 55.4
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.5e-56 223.8 160 71.9
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 3.3e-56 222.6 220 55.5
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.6e-55 220.3 211 58.3
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.6e-55 220.3 180 61.7
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.6e-55 220.3 178 62.4
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.6e-55 220.3 183 62.8
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.6e-55 220.3 191 59.2
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 2.1e-55 219.9 224 55.8
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 3.7e-55 219.2 214 54.2
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 4.8e-55 218.8 206 59.2
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.1e-54 217.6 222 53.6
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 1.1e-54 217.6 200 56.5
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.8e-54 216.9 211 57.3
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 2.4e-54 216.5 201 57.7
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 5.3e-54 215.3 171 64.9
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 5.3e-54 215.3 237 53.6
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.5e-53 213.8 224 54.9
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.0e-53 213.4 244 50.0
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 4.5e-53 212.2 214 52.8
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 5.8e-53 211.8 201 58.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 2.2e-52 209.9 177 61.0
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.2e-52 209.9 174 59.2
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 2.2e-52 209.9 231 52.4
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.9e-52 209.5 176 58.5
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.1e-51 207.6 174 56.9
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.9e-51 206.8 233 51.9
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.9e-51 206.8 187 57.2
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 2.4e-51 206.5 174 59.8
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 7.1e-51 204.9 187 57.8
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 9.3e-51 204.5 174 57.5
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 9.3e-51 204.5 189 54.0
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.2e-50 204.1 207 54.1
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.7e-50 203.0 125 80.8
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 1.0e-49 201.1 174 56.3
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 5.1e-49 198.7 209 55.0
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 6.7e-49 198.4 212 48.6
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 8.7e-49 198.0 199 55.3
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.5e-48 197.2 212 48.6
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 1.5e-48 197.2 212 48.6
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.5e-48 197.2 279 43.7
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.5e-48 196.4 216 48.6
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 4.3e-48 195.7 199 54.8
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 5.6e-48 195.3 247 47.8
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 9.6e-48 194.5 246 48.0
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 9.6e-48 194.5 212 48.1
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 9.6e-48 194.5 250 45.2
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.3e-47 194.1 212 47.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 4.8e-47 192.2 234 46.6
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 1.1e-46 191.0 224 50.0
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.4e-46 189.9 168 61.9
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 3.4e-45 186.0 212 50.9
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 4.5e-45 185.7 290 44.1
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 6.7e-33 145.2 154 48.7
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 5.7e-32 142.1 233 39.5
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.5e-29 134.0 131 48.9
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.4e-25 120.9 229 35.4
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.7e-23 114.0 110 60.9
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 1.8e-22 110.5 204 32.8
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.8e-22 110.5 101 55.4
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 1.2e-21 107.8 164 45.1
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 7.4e-16 88.6 70 54.3
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 4.7e-10 69.3 221 27.1
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 2.8e-07 60.1 73 50.7
MD03G1037100 Malus domestica HOM05D006765 ORTHO05D008554 5.3e-06 55.8 101 41.6


User provided reference genes

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