Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G0341 Fragaria x ananassa HOM05D000760 ORTHO05D004258 4.4e-46 187.6 92 100.0
FAN04G0024 Fragaria x ananassa HOM05D000760 ORTHO05D004258 3.7e-45 184.5 90 100.0
FAN18G2632 Fragaria x ananassa HOM05D000760 ORTHO05D000618 1.5e-09 66.2 34 88.2
FvH4_5g29520 Fragaria vesca HOM05D000760 ORTHO05D000618 1.9e-09 65.9 33 90.9
FAN04G1591 Fragaria x ananassa HOM05D000760 ORTHO05D000618 1.9e-09 65.9 33 90.9
FAN08G0422 Fragaria x ananassa HOM05D000760 ORTHO05D000618 1.9e-09 65.9 33 90.9
FAN13G3052 Fragaria x ananassa HOM05D000760 ORTHO05D000618 1.9e-09 65.9 33 90.9
GSVIVG01022966001 Vitis vinifera HOM05D000760 ORTHO05D000618 7.3e-09 63.9 33 84.8
Glyma.15G046800 Glycine max HOM05D000760 ORTHO05D000618 9.5e-09 63.5 34 82.4
Lalb_Chr20g0123441 Lupinus albus HOM05D000760 ORTHO05D000618 9.5e-09 63.5 33 84.8
RcHm_v2.0_Chr7g0222471 Rosa chinensis HOM05D000760 ORTHO05D000618 1.2e-08 63.2 33 84.8
Glyma.08G186000 Glycine max HOM05D000760 ORTHO05D000618 1.6e-08 62.8 33 81.8
Actinidia00208 Actinidia chinensis HOM05D000760 ORTHO05D000618 2.1e-08 62.4 33 81.8
FAN08G2790 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.8e-08 62.0 29 100.0
Lsat_1_v5_gn_9_118381 Lactuca sativa HOM05D000760 ORTHO05D000618 2.8e-08 62.0 35 71.4
Thecc.02G038400 Theobroma cacao HOM05D000760 ORTHO05D000618 3.6e-08 61.6 36 75.0
TWI23G1285 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 3.6e-08 61.6 33 81.8
Duzib132G0370 Durio zibethinus HOM05D000760 ORTHO05D000618 4.7e-08 61.2 33 78.8
arahy.Tifrunner.gnm1.ann1.3T4GA9 Arachis hypogaea HOM05D000760 ORTHO05D000618 6.1e-08 60.8 136 34.6
COL.COLO4_17868 Corchorus olitorius HOM05D000760 ORTHO05D000618 6.1e-08 60.8 33 78.8
Duzib052G0018 Durio zibethinus HOM05D000760 ORTHO05D000618 6.1e-08 60.8 36 75.0
Lsat_1_v5_gn_5_109320 Lactuca sativa HOM05D000760 ORTHO05D000618 6.1e-08 60.8 30 83.3
Potri.001G210900 Populus trichocarpa HOM05D000760 ORTHO05D000618 6.1e-08 60.8 33 78.8
SalBow5G2156 Salvia bowleyana HOM05D000760 ORTHO05D000618 6.1e-08 60.8 33 75.8
Dinv24280 Davidia involucrata HOM05D000760 ORTHO05D000618 8.0e-08 60.5 33 81.8
ECA234G3923 Erigeron canadensis HOM05D000760 ORTHO05D000618 8.0e-08 60.5 30 83.3
Rhsim11G0129600 Rhododendron simsii HOM05D000760 ORTHO05D000618 8.0e-08 60.5 33 78.8
Duzib248G0425 Durio zibethinus HOM05D000760 ORTHO05D000618 1.0e-07 60.1 33 75.8
FvH4_2g08113 Fragaria vesca HOM05D000014 ORTHO05D000016 1.0e-07 60.1 33 87.9
MD08G1229000 Malus domestica HOM05D000760 ORTHO05D000618 1.0e-07 60.1 29 89.7
Oeu049823.1 Olea europaea HOM05D000760 ORTHO05D000618 1.0e-07 60.1 33 75.8
CAN.G53.44 Capsicum annuum HOM05D000760 ORTHO05D000618 1.4e-07 59.7 29 86.2
MELO3C014382.2 Cucumis melo HOM05D000760 ORTHO05D000618 1.4e-07 59.7 33 75.8
ECA240G1035 Erigeron canadensis HOM05D000760 ORTHO05D000618 1.4e-07 59.7 35 71.4
Migut.B00839 Erythranthe guttata HOM05D000760 ORTHO05D000618 1.4e-07 59.7 29 86.2
Lj5A252T50 Lonicera japonica HOM05D000760 ORTHO05D000618 1.4e-07 59.7 33 78.8
Nitab4.5_0001706g0050 Nicotiana tabacum HOM05D000760 ORTHO05D000618 1.4e-07 59.7 29 86.2
Nitab4.5_0002245g0050 Nicotiana tabacum HOM05D000760 ORTHO05D000618 1.4e-07 59.7 33 78.8
Nitab4.5_0002256g0050 Nicotiana tabacum HOM05D000760 ORTHO05D000618 1.4e-07 59.7 29 86.2
Nitab4.5_0007420g0010 Nicotiana tabacum HOM05D000760 ORTHO05D000618 1.4e-07 59.7 33 78.8
Peaxi162Scf00003g03827 Petunia axillaris HOM05D000760 ORTHO05D000618 1.4e-07 59.7 29 86.2
TWI14G0653 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 1.4e-07 59.7 33 78.8
TWI59G1059 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 1.4e-07 59.7 30 86.7
Atru.chr6.652 Acer truncatum HOM05D000760 ORTHO05D000618 1.8e-07 59.3 29 86.2
Atru.chr6.658 Acer truncatum HOM05D000760 ORTHO05D000618 1.8e-07 59.3 29 86.2
Gohir.A04G127200 Gossypium hirsutum HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Gohir.D04G172000 Gossypium hirsutum HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Gorai.012G161000 Gossypium raimondii HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Oeu008892.1 Olea europaea HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Prupe.1G568200 Prunus persica HOM05D000760 ORTHO05D000618 1.8e-07 59.3 29 86.2
QL11p018468 Quercus lobata HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Sabra01G0162900 Salix brachista HOM05D000760 ORTHO05D000618 1.8e-07 59.3 33 75.8
Ca_00077_v3 Cicer arietinum L. HOM05D000760 ORTHO05D000618 2.3e-07 58.9 33 75.8
Ciclev10002263m.g Citrus clementina HOM05D000760 ORTHO05D000618 2.3e-07 58.9 33 75.8
Dinv19365 Davidia involucrata HOM05D000760 ORTHO05D000618 2.3e-07 58.9 33 78.8
Phvul.002G250200 Phaseolus vulgaris HOM05D000760 ORTHO05D000618 2.3e-07 58.9 33 75.8
Prupe.1G568100 Prunus persica HOM05D000760 ORTHO05D000618 2.3e-07 58.9 31 83.9
VMungo0251G3078 Vigna mungo HOM05D000760 ORTHO05D000618 2.3e-07 58.9 33 75.8
Peaxi162Scf00011g00355 Petunia axillaris HOM05D000760 ORTHO05D000618 3.0e-07 58.5 33 78.8
Potri.003G019300 Populus trichocarpa HOM05D000760 ORTHO05D000618 3.0e-07 58.5 28 89.3
Sabra03G0010800 Salix brachista HOM05D000760 ORTHO05D000618 3.0e-07 58.5 28 89.3
Actinidia26145 Actinidia chinensis HOM05D000760 ORTHO05D000618 4.0e-07 58.2 33 75.8
Lj9A306T62 Lonicera japonica HOM05D000760 ORTHO05D000618 4.0e-07 58.2 29 82.8
Manes.07G015500 Manihot esculenta HOM05D000760 ORTHO05D000618 4.0e-07 58.2 29 86.2
Medtr2g007210 Medicago truncatula HOM05D000760 ORTHO05D000618 4.0e-07 58.2 29 82.8
Psat2g078760 Pisum sativum HOM05D000760 ORTHO05D000618 4.0e-07 58.2 31 77.4
TPR.G24560 Trifolium pratense HOM05D000760 ORTHO05D000618 4.0e-07 58.2 29 86.2
EL10Ac6g14074 Beta vulgaris HOM05D000760 ORTHO05D000618 5.2e-07 57.8 33 72.7
CANSAT11G0121 Cannabis sativa HOM05D000760 ORTHO05D000618 5.2e-07 57.8 28 89.3
Cpa.g.sc113.62 Carica papaya HOM05D000760 ORTHO05D000618 5.2e-07 57.8 33 69.7
CiPaw.05G044100 Carya illinoinensis HOM05D000760 ORTHO05D000618 5.2e-07 57.8 29 82.8
HanXRQChr09g0246091 Helianthus annuus HOM05D000760 ORTHO05D000618 5.2e-07 57.8 35 65.7
MD08G1228900 Malus domestica HOM05D000760 ORTHO05D000618 5.2e-07 57.8 31 80.6
Medtr5g058140 Medicago truncatula HOM05D000760 ORTHO05D000618 5.2e-07 57.8 28 89.3
Psat7g061640 Pisum sativum HOM05D000760 ORTHO05D000618 5.2e-07 57.8 30 80.0
Sopen10g016010 Solanum pennellii HOM05D000760 ORTHO05D000618 5.2e-07 57.8 29 82.8
TPR.G7103 Trifolium pratense HOM05D000760 ORTHO05D000618 5.2e-07 57.8 31 80.6
Cfa005524 Carpinus fangiana HOM05D000760 ORTHO05D000618 6.8e-07 57.4 29 82.8
Cc02_g22470 Coffea canephora HOM05D000760 ORTHO05D000618 6.8e-07 57.4 36 69.4
Haze_01667 Corylus avellana HOM05D000760 ORTHO05D000618 6.8e-07 57.4 29 82.8
Peaxi162Scf00152g01332 Petunia axillaris HOM05D000760 ORTHO05D000618 6.8e-07 57.4 30 76.7
Phvul.009G123400 Phaseolus vulgaris HOM05D000760 ORTHO05D000618 6.8e-07 57.4 33 69.7
SGA_v2.0_scaffold110G31299 Striga asiatica HOM05D000760 ORTHO05D000618 6.8e-07 57.4 33 72.7
TPR.G2116 Trifolium pratense HOM05D000760 ORTHO05D000618 6.8e-07 57.4 34 70.6
vmacro01762 Vaccinium macrocarpon HOM05D000760 ORTHO05D000618 6.8e-07 57.4 28 85.7
CSS0005433 Camellia sinensis var. sinensis HOM05D000760 ORTHO05D000618 8.9e-07 57.0 33 69.7
CSS0023627 Camellia sinensis var. sinensis HOM05D000760 ORTHO05D000618 8.9e-07 57.0 33 69.7
CsaV3_6G037340 Cucumis sativus L. HOM05D000760 ORTHO05D000618 8.9e-07 57.0 33 69.7
DCAR_029254 Daucus carota HOM05D000760 ORTHO05D000618 8.9e-07 57.0 28 85.7
Hma1.2p1_0217F.1_g092020 Hydrangea macrophylla HOM05D000760 ORTHO05D000618 8.9e-07 57.0 33 75.8
Solyc10g045640.2 Solanum lycopersicum HOM05D000760 ORTHO05D000618 8.9e-07 57.0 29 82.8
ClCG09G014220 Citrullus lanatus HOM05D000760 ORTHO05D000618 1.2e-06 56.6 33 69.7
Lj4g0016181 Lotus japonicus HOM05D000760 ORTHO05D000618 1.2e-06 56.6 29 79.3
MD15G1422800 Malus domestica HOM05D000760 ORTHO05D000618 1.2e-06 56.6 30 80.0
CAN.G1577.15 Capsicum annuum HOM05D000760 ORTHO05D000618 1.5e-06 56.2 33 72.7
CsaV3_3G018860 Cucumis sativus L. HOM05D000760 ORTHO05D000618 1.5e-06 56.2 34 67.6
Migut.N01042 Erythranthe guttata HOM05D000760 ORTHO05D000618 1.5e-06 56.2 29 75.9
Eucgr.G00581 Eucalyptus grandis HOM05D000760 ORTHO05D000618 1.5e-06 56.2 33 69.7
vmacro19895 Vaccinium macrocarpon HOM05D000760 ORTHO05D000618 1.5e-06 56.2 36 69.4
BcaB04g20170 Brassica carinata HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BcaB04g20171 Brassica carinata HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BcaB07g31146 Brassica carinata HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BcaC04g22086 Brassica carinata HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BcaC09g49532 Brassica carinata HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
A01p27940 Brassica napus HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
A09p18850 Brassica napus HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
C01p35510 Brassica napus HOM05D000760 ORTHO05D014827 2.0e-06 55.8 26 84.6
C09p23630 Brassica napus HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BolC1t03510H Brassica oleracea HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BolC9t55283H Brassica oleracea HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BraA01t02931Z Brassica rapa HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
BraA09t37506Z Brassica rapa HOM05D000760 ORTHO05D000618 2.0e-06 55.8 26 84.6
Glyma.04G251300 Glycine max HOM05D000760 ORTHO05D000618 2.0e-06 55.8 33 69.7
Glyma.08G127800 Glycine max HOM05D000760 ORTHO05D000618 2.0e-06 55.8 28 85.7
Manes.02G161900 Manihot esculenta HOM05D000760 ORTHO05D000618 2.0e-06 55.8 36 63.9
Manes.18G075700 Manihot esculenta HOM05D000760 ORTHO05D000618 2.0e-06 55.8 36 66.7
Oeu045942.2 Olea europaea HOM05D000760 ORTHO05D000618 2.0e-06 55.8 33 69.7
Solyc01g104220.3 Solanum lycopersicum HOM05D000760 ORTHO05D000618 2.0e-06 55.8 33 75.8
Sopen01g046660 Solanum pennellii HOM05D000760 ORTHO05D000618 2.0e-06 55.8 33 75.8
AUR62014270 Chenopodium quinoa HOM05D000760 ORTHO05D000618 2.6e-06 55.5 33 69.7
AUR62042256 Chenopodium quinoa HOM05D000760 ORTHO05D000618 2.6e-06 55.5 33 69.7
ClCG05G009720 Citrullus lanatus HOM05D000760 ORTHO05D000618 2.6e-06 55.5 34 67.6
Medtr8g088940 Medicago truncatula HOM05D000760 ORTHO05D000618 2.6e-06 55.5 31 83.9
Medtr8g088980 Medicago truncatula HOM05D000760 ORTHO05D000618 2.6e-06 55.5 31 83.9
Psat1g224800 Pisum sativum HOM05D000760 ORTHO05D000618 2.6e-06 55.5 33 69.7
THA.LOC104816834 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 2.6e-06 55.5 33 66.7
THA.LOC104820379 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 2.6e-06 55.5 33 66.7
Aqoxy6G00182 Aquilegia oxysepala HOM05D000760 ORTHO05D000618 3.4e-06 55.1 29 82.8
MSTRG.16522 Avicennia marina HOM05D000760 ORTHO05D000618 3.4e-06 55.1 33 63.6
MELO3C019479.2 Cucumis melo HOM05D000760 ORTHO05D000618 3.4e-06 55.1 29 75.9
THA.LOC104823708 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 3.4e-06 55.1 33 66.7
CiPaw.06G147500 Carya illinoinensis HOM05D000760 ORTHO05D000618 4.4e-06 54.7 29 79.3
Glyma.06G111400 Glycine max HOM05D000760 ORTHO05D000618 4.4e-06 54.7 33 66.7
PSO170G4313 Papaver somniferum HOM05D000760 ORTHO05D000618 4.4e-06 54.7 34 76.5
PSO528G0061 Papaver somniferum HOM05D000760 ORTHO05D000618 4.4e-06 54.7 34 76.5
Carub.0002s0701 Capsella rubella HOM05D000760 ORTHO05D000618 5.7e-06 54.3 25 88.0
Ca_17818_v3 Cicer arietinum L. HOM05D000760 ORTHO05D000618 5.7e-06 54.3 29 79.3
Thhalv10023686m.g Eutrema salsugineum HOM05D000760 ORTHO05D000618 5.7e-06 54.3 26 80.8
Phvul.006G214400 Phaseolus vulgaris HOM05D000760 ORTHO05D000618 5.7e-06 54.3 30 73.3
PGR142G0929 Punica granatum HOM05D000760 ORTHO05D000618 5.7e-06 54.3 28 82.1
PGR142G2487 Punica granatum HOM05D000760 ORTHO05D000618 5.7e-06 54.3 28 82.1
Solyc06g060440.2 Solanum lycopersicum HOM05D000760 ORTHO05D000618 5.7e-06 54.3 30 73.3
PGSC0003DMG400023791 Solanum tuberosum HOM05D000760 ORTHO05D000618 5.7e-06 54.3 33 72.7
ATR0193G019 Amborella trichopoda HOM05D000760 ORTHO05D000618 7.5e-06 53.9 29 75.9
arahy.Tifrunner.gnm1.ann1.Z6MEWL Arachis hypogaea HOM05D000760 ORTHO05D000618 7.5e-06 53.9 33 69.7
CARHR054650 Cardamine hirsuta HOM05D000760 ORTHO05D000618 7.5e-06 53.9 26 76.9
Gohir.A12G031800 Gossypium hirsutum HOM05D000760 ORTHO05D000618 7.5e-06 53.9 31 71.0
Gohir.D12G040500 Gossypium hirsutum HOM05D000760 ORTHO05D000618 7.5e-06 53.9 31 71.0
Gorai.008G042200 Gossypium raimondii HOM05D000760 ORTHO05D000618 7.5e-06 53.9 31 71.0
Os06g0210100 Oryza sativa ssp. japonica HOM05D000760 ORTHO05D000618 7.5e-06 53.9 30 73.3
Sp2g05840 Schrenkiella parvula HOM05D000760 ORTHO05D000618 7.5e-06 53.9 26 80.8
Aa31LG1G5440 Aethionema arabicum HOM05D000760 ORTHO05D000618 9.8e-06 53.5 27 77.8
AL1G67200 Arabidopsis lyrata HOM05D000760 ORTHO05D000618 9.8e-06 53.5 25 84.0
AT1G57620 Arabidopsis thaliana HOM05D000760 ORTHO05D000618 9.8e-06 53.5 25 84.0
ECA247G1737 Erigeron canadensis HOM05D000760 ORTHO05D000618 9.8e-06 53.5 30 70.0
Glyma.05G169500 Glycine max HOM05D000760 ORTHO05D000618 9.8e-06 53.5 26 88.5
Nn1g08732 Nelumbo nucifera HOM05D000760 ORTHO05D000618 9.8e-06 53.5 35 60.0


User provided reference genes

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