Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G0153 Fragaria x ananassa HOM05D013659 ORTHO05D012679 2.2e-81 305.4 144 100.0
RcHm_v2.0_Chr4g0410641 Rosa chinensis HOM05D000003 ORTHO05D000004 6.4e-28 127.9 110 50.9
FvH4_3g30011 Fragaria vesca HOM05D008833 ORTHO05D010662 8.7e-25 117.5 79 63.3
FvH4_3g22561 Fragaria vesca HOM05D000003 ORTHO05D000006 1.7e-20 103.2 110 41.8
RcHm_v2.0_Chr2g0144601 Rosa chinensis HOM05D013659 ORTHO05D012679 1.0e-17 94.0 130 37.7
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-16 90.5 110 33.6
FvH4_1g26332 Fragaria vesca HOM05D000003 ORTHO05D000004 3.6e-15 85.5 110 32.7
FAN12G0535 Fragaria x ananassa HOM05D008833 ORTHO05D000167 4.8e-15 85.1 89 44.9
RcHm_v2.0_Chr3g0481921 Rosa chinensis HOM05D000003 ORTHO05D000004 4.8e-15 85.1 145 31.0
RcHm_v2.0_Chr3g0471531 Rosa chinensis HOM05D065238 ORTHO05D012679 8.1e-15 84.3 94 34.0
FvH4_6g12333 Fragaria vesca HOM05D008833 ORTHO05D010662 6.4e-12 74.7 45 86.7
FvH4_3g21363 Fragaria vesca HOM05D000514 ORTHO05D000222 5.4e-11 71.6 108 45.4
RcHm_v2.0_Chr7g0206951 Rosa chinensis HOM05D013659 ORTHO05D012679 1.6e-10 70.1 87 39.1
FAN19G2126 Fragaria x ananassa HOM05D001715 ORTHO05D012679 3.5e-10 68.9 83 38.6
FvH4_4g07171 Fragaria vesca HOM05D008833 ORTHO05D012679 1.3e-09 67.0 81 38.3
RcHm_v2.0_Chr5g0044911 Rosa chinensis HOM05D013659 ORTHO05D012679 1.3e-09 67.0 63 46.0
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 8.7e-09 64.3 111 29.7
RcHm_v2.0_Chr1g0346251 Rosa chinensis HOM05D000003 ORTHO05D000004 2.5e-08 62.8 104 31.7
FAN06G4530 Fragaria x ananassa HOM05D013659 ORTHO05D012679 4.3e-08 62.0 59 45.8
FAN06G4742 Fragaria x ananassa HOM05D013659 ORTHO05D012679 4.3e-08 62.0 59 45.8
FvH4_1g26014 Fragaria vesca HOM05D000003 ORTHO05D000006 7.4e-08 61.2 81 34.6
RcHm_v2.0_Chr3g0477221 Rosa chinensis HOM05D013659 ORTHO05D012679 7.4e-08 61.2 53 47.2
RcHm_v2.0_Chr5g0007641 Rosa chinensis HOM05D013659 ORTHO05D012679 7.4e-08 61.2 63 38.1
CANSAT80G1560 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.1 101 31.7
FvH4_3g02851 Fragaria vesca HOM05D013659 ORTHO05D012679 2.8e-07 59.3 57 38.6
FvH4_3g30481 Fragaria vesca HOM05D000003 ORTHO05D029558 2.8e-07 59.3 69 33.3
CANSAT56G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 58.9 101 31.7
FAN02G1338 Fragaria x ananassa HOM05D013134 ORTHO05D012679 3.7e-07 58.9 59 44.1
CANSAT01G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-07 58.5 100 30.0
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 134 23.9
FAN14G4974 Fragaria x ananassa HOM05D013134 ORTHO05D012679 1.4e-06 57.0 58 43.1
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-06 54.7 100 30.0
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-06 54.7 100 28.0
TPR.G16652 Trifolium pratense HOM05D011174 ORTHO05D004093 6.9e-06 54.7 102 25.5


User provided reference genes

Program Settings