Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3731 Fragaria x ananassa HOM05D026264 ORTHO05D029669 2.3e-67 258.8 137 100.0
FvH4_2g35170 Fragaria vesca HOM05D026264 ORTHO05D029669 2.1e-60 235.7 138 92.8
RcHm_v2.0_Chr6g0306771 Rosa chinensis HOM05D026264 ORTHO05D029669 1.0e-43 180.3 135 75.6
FAN20G1852 Fragaria x ananassa HOM05D026264 ORTHO05D029669 4.2e-37 158.3 138 68.8
FAN27G2277 Fragaria x ananassa HOM05D000805 ORTHO05D000624 5.5e-37 157.9 129 75.2
FAN20G2238 Fragaria x ananassa HOM05D000805 ORTHO05D000624 4.0e-11 72.0 88 55.7
CiPaw.07G201600 Carya illinoinensis HOM05D000805 ORTHO05D000624 5.2e-11 71.6 92 51.1
FvH4_2g35151 Fragaria vesca HOM05D000805 ORTHO05D000624 8.8e-11 70.9 96 53.1
FvH4_2g35160 Fragaria vesca HOM05D000805 ORTHO05D000624 8.8e-11 70.9 82 54.9
FAN20G2644 Fragaria x ananassa HOM05D000805 ORTHO05D000624 8.8e-11 70.9 96 53.1
PSO063G5652 Papaver somniferum HOM05D000805 ORTHO05D000624 1.2e-10 70.5 81 54.3
PSO832G3184 Papaver somniferum HOM05D000805 ORTHO05D000624 1.2e-10 70.5 81 54.3
Lalb_Chr23g0269771 Lupinus albus HOM05D000805 ORTHO05D000624 1.5e-10 70.1 91 48.4
Glyma.04G077600 Glycine max HOM05D000805 ORTHO05D000624 2.0e-10 69.7 88 50.0
Glyma.06G078700 Glycine max HOM05D000805 ORTHO05D000624 2.0e-10 69.7 88 50.0
Ciclev10009815m.g Citrus clementina HOM05D000805 ORTHO05D000624 2.6e-10 69.3 86 52.3
EL10Ac2g03961 Beta vulgaris HOM05D000805 ORTHO05D000624 3.4e-10 68.9 81 50.6
Cfa013392 Carpinus fangiana HOM05D000805 ORTHO05D000624 3.4e-10 68.9 85 52.9
Thecc.09G049000 Theobroma cacao HOM05D000805 ORTHO05D000624 3.4e-10 68.9 98 49.0
Gohir.D06G089800 Gossypium hirsutum HOM05D000805 ORTHO05D000624 4.4e-10 68.6 80 51.2
Gorai.010G103700 Gossypium raimondii HOM05D000805 ORTHO05D000624 4.4e-10 68.6 80 51.2
RcHm_v2.0_Chr6g0306781 Rosa chinensis HOM05D000805 ORTHO05D000624 4.4e-10 68.6 99 51.5
AUR62040213 Chenopodium quinoa HOM05D000805 ORTHO05D000624 5.7e-10 68.2 81 51.9
Gohir.A06G090900 Gossypium hirsutum HOM05D000805 ORTHO05D000624 5.7e-10 68.2 80 51.2
TAR626G0937 Trochodendron aralioides HOM05D000805 ORTHO05D000624 5.7e-10 68.2 104 44.2
TAR626G1162 Trochodendron aralioides HOM05D000805 ORTHO05D000624 5.7e-10 68.2 104 44.2
Haze_21934 Corylus avellana HOM05D000805 ORTHO05D000624 7.5e-10 67.8 85 51.8
Gohir.D05G046400 Gossypium hirsutum HOM05D000805 ORTHO05D000624 7.5e-10 67.8 86 50.0
TPR.G12313 Trifolium pratense HOM05D000805 ORTHO05D000624 9.8e-10 67.4 92 50.0
Nn8g39009 Nelumbo nucifera HOM05D000805 ORTHO05D000624 1.3e-09 67.0 81 51.9
COL.COLO4_21008 Corchorus olitorius HOM05D000805 ORTHO05D000624 1.7e-09 66.6 106 44.3
MBI04_g06987_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 1.7e-09 66.6 95 47.4
Sc06g0000870 Simmondsia chinensis HOM05D000805 ORTHO05D000624 1.7e-09 66.6 104 43.3
Gorai.009G047800 Gossypium raimondii HOM05D000805 ORTHO05D000624 2.8e-09 65.9 86 50.0
BcaB06g29636 Brassica carinata HOM05D000805 ORTHO05D000624 3.7e-09 65.5 108 41.7
BolC4t27103H Brassica oleracea HOM05D000805 ORTHO05D000624 3.7e-09 65.5 108 41.7
Lalb_Chr08g0242891 Lupinus albus HOM05D000805 ORTHO05D000624 3.7e-09 65.5 104 44.2
Ca_15641_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 4.8e-09 65.1 78 53.8
Dinv23401 Davidia involucrata HOM05D000805 ORTHO05D000624 4.8e-09 65.1 104 42.3
Lj1g0002121 Lotus japonicus HOM05D000805 ORTHO05D000624 4.8e-09 65.1 80 51.2
Medtr3g109190 Medicago truncatula HOM05D000805 ORTHO05D000624 6.3e-09 64.7 78 52.6
Prupe.1G443700 Prunus persica HOM05D000805 ORTHO05D000624 6.3e-09 64.7 78 52.6
RcHm_v2.0_Chr6g0306791 Rosa chinensis HOM05D000805 ORTHO05D000624 6.3e-09 64.7 96 49.0
DCAR_003073 Daucus carota HOM05D000805 ORTHO05D000624 1.1e-08 63.9 80 53.8
Aa31LG5G9790 Aethionema arabicum HOM05D000805 ORTHO05D000624 1.4e-08 63.5 81 48.1
ATR0705G219 Amborella trichopoda HOM05D000805 ORTHO05D000624 1.4e-08 63.5 81 48.1
Rhsim11G0049200 Rhododendron simsii HOM05D000805 ORTHO05D000624 1.4e-08 63.5 108 41.7
A04p20090 Brassica napus HOM05D000805 ORTHO05D000624 1.8e-08 63.2 104 41.3
BraA04t17591Z Brassica rapa HOM05D000805 ORTHO05D000624 1.8e-08 63.2 104 41.3
Duzib187G0010 Durio zibethinus HOM05D000805 ORTHO05D000624 1.8e-08 63.2 80 51.2
FvH4_3g15571 Fragaria vesca HOM05D000805 ORTHO05D000624 1.8e-08 63.2 114 44.7
MD08G1109100 Malus domestica HOM05D000805 ORTHO05D000624 1.8e-08 63.2 92 47.8
arahy.Tifrunner.gnm1.ann1.YSQ5WX Arachis hypogaea HOM05D000805 ORTHO05D000624 2.4e-08 62.8 81 49.4
Gohir.A07G022188 Gossypium hirsutum HOM05D000805 ORTHO05D000624 2.4e-08 62.8 82 50.0
THA.LOC104818593 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 3.1e-08 62.4 81 44.4
Potri.006G234900 Populus trichocarpa HOM05D000805 ORTHO05D000624 4.1e-08 62.0 91 46.2
Lalb_Chr11g0064601 Lupinus albus HOM05D000805 ORTHO05D000624 5.4e-08 61.6 99 42.4
Aqoxy7G01357 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 7.0e-08 61.2 81 46.9
arahy.Tifrunner.gnm1.ann1.N1YYK3 Arachis hypogaea HOM05D000805 ORTHO05D000624 7.0e-08 61.2 81 48.1
Eucgr.C00618 Eucalyptus grandis HOM05D000805 ORTHO05D000624 1.2e-07 60.5 81 50.6
Phvul.009G103600 Phaseolus vulgaris HOM05D000805 ORTHO05D000624 1.2e-07 60.5 86 44.2
Manes.16G076500 Manihot esculenta HOM05D000805 ORTHO05D000624 1.6e-07 60.1 81 50.6
Carub.0004s0571 Capsella rubella HOM05D000805 ORTHO05D000624 2.0e-07 59.7 99 43.4
Cc00_g09240 Coffea canephora HOM05D000805 ORTHO05D000624 2.0e-07 59.7 81 46.9
TAR383G0309 Trochodendron aralioides HOM05D000805 ORTHO05D000624 2.0e-07 59.7 103 38.8
TWI63G0923 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 2.7e-07 59.3 105 45.7
AT2G25890 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 3.5e-07 58.9 99 42.4
Lj8P565T8 Lonicera japonica HOM05D000805 ORTHO05D000624 3.5e-07 58.9 81 45.7
Potri.018G057800 Populus trichocarpa HOM05D000805 ORTHO05D000624 3.5e-07 58.9 94 43.6
ECA233G2751 Erigeron canadensis HOM05D000805 ORTHO05D000624 4.5e-07 58.5 81 48.1
VMungo1309G1519 Vigna mungo HOM05D000805 ORTHO05D000624 4.5e-07 58.5 87 43.7
PSO782G4143 Papaver somniferum HOM05D000805 ORTHO05D000624 5.9e-07 58.2 97 40.2
PSO063G0492 Papaver somniferum HOM05D000805 ORTHO05D000624 7.7e-07 57.8 97 40.2
Cpa.g.sc1868.2 Carica papaya HOM05D000805 ORTHO05D000624 1.0e-06 57.4 81 45.7
Oeu038822.1 Olea europaea HOM05D000805 ORTHO05D000624 1.0e-06 57.4 81 45.7
Sabra06G0183300 Salix brachista HOM05D000805 ORTHO05D000624 1.0e-06 57.4 90 42.2
CSS0007173 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 1.3e-06 57.0 96 41.7
Migut.F00529 Erythranthe guttata HOM05D000805 ORTHO05D000624 1.7e-06 56.6 81 43.2
CDE09G0809 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 2.3e-06 56.2 81 44.4
CDE02G3253 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 2.9e-06 55.8 81 42.0
Lj1P975T23 Lonicera japonica HOM05D000805 ORTHO05D000624 3.8e-06 55.5 98 38.8
Oeu021666.1 Olea europaea HOM05D000805 ORTHO05D000624 3.8e-06 55.5 103 39.8
CSS0028786 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 5.0e-06 55.1 77 46.8
MBI04_g33724_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 5.0e-06 55.1 81 46.9
MBI04_g41759_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 5.0e-06 55.1 81 46.9
Gohir.D07G024050 Gossypium hirsutum HOM05D000805 ORTHO05D000624 6.6e-06 54.7 82 43.9
Gorai.001G024800 Gossypium raimondii HOM05D000805 ORTHO05D000624 6.6e-06 54.7 82 43.9
Lsat_1_v5_gn_8_9800 Lactuca sativa HOM05D000805 ORTHO05D000624 6.6e-06 54.7 78 46.2
TWI14G1264 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 6.6e-06 54.7 101 44.6
DCAR_018075 Daucus carota HOM05D000805 ORTHO05D000624 8.6e-06 54.3 70 51.4
HanXRQChr08g0223251 Helianthus annuus HOM05D000805 ORTHO05D000624 8.6e-06 54.3 78 44.9
Peaxi162Scf00271g00056 Petunia axillaris HOM05D000805 ORTHO05D000624 8.6e-06 54.3 81 44.4


User provided reference genes

Program Settings