Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 0.0e+00 1453.3 785 100.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 0.0e+00 1274.6 789 89.1
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 0.0e+00 1270.4 794 88.7
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 0.0e+00 1223.8 746 89.9
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 5.9e-301 1037.3 793 73.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 9.6e-211 737.6 814 56.9
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 5.3e-193 678.7 790 54.9
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.2e-184 651.0 788 53.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 4.7e-133 479.6 809 41.9
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 5.4e-121 439.5 804 38.4
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 5.4e-121 439.5 813 38.7
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 6.2e-117 426.0 829 39.2
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.3e-110 403.7 828 39.3
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.9e-105 387.9 827 38.0
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.4e-100 371.7 837 37.6
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 6.9e-100 369.4 804 36.3
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.0e-99 367.9 814 38.3
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 8.4e-98 362.5 826 36.3
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.1e-94 352.1 843 35.7
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.3e-94 350.5 789 40.3
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 4.5e-91 340.1 729 36.5
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 8.4e-90 335.9 774 36.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.1e-89 335.5 807 35.8
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 4.2e-89 333.6 730 37.3
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.5e-88 330.5 750 35.3
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.3e-85 319.7 758 35.5
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 5.9e-83 313.2 821 35.4
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.5e-81 307.8 751 36.1
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 3.2e-81 307.4 851 34.1
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 9.4e-81 305.8 775 35.0
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 2.3e-79 301.2 593 38.3
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.9e-78 298.1 719 35.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.6e-72 278.5 824 32.6
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 2.1e-72 278.1 539 39.7
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 6.7e-71 273.1 795 33.3
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 5.3e-68 263.5 791 34.6
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.8e-66 257.3 793 32.8
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 7.2e-65 253.1 795 31.9
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.7e-61 241.9 780 31.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.2e-58 231.5 764 31.2
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 8.5e-58 229.6 793 31.1
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 7.2e-57 226.5 736 31.1
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 4.7e-56 223.8 778 30.8
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 6.7e-55 219.9 750 30.4
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 9.7e-54 216.1 772 30.1
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.3e-53 215.7 787 29.9
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-52 212.2 468 36.1
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.4e-52 212.2 742 29.8
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 5.3e-52 210.3 775 30.1
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.2e-50 204.9 717 31.7
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.2e-50 204.9 623 32.7
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 5.5e-49 200.3 807 31.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 1.6e-48 198.7 782 29.2
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 6.1e-48 196.8 777 27.8
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.3e-45 189.1 790 30.1
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 2.8e-45 188.0 716 28.2
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.7e-45 187.6 719 28.5
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.8e-44 185.3 597 33.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 4.1e-44 184.1 604 33.8
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-43 182.6 491 32.8
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.0e-43 181.8 780 29.5
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 5.0e-42 177.2 772 28.6
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 7.2e-41 173.3 690 28.8
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.2e-40 172.6 721 27.9
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 2.3e-39 168.3 578 32.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 6.8e-39 166.8 757 26.7
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 4.4e-38 164.1 803 28.6
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.7e-37 162.2 727 27.8
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 4.9e-37 160.6 766 29.0
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.4e-36 159.1 771 28.5
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 3.5e-35 154.5 768 27.9
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 4.5e-35 154.1 666 28.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.7e-34 152.1 776 27.7
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.9e-34 151.4 745 25.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.1e-33 149.4 738 27.5
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 9.5e-33 146.4 615 28.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 9.5e-33 146.4 607 27.3
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 6.1e-32 143.7 792 27.8
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.0e-31 142.9 295 39.3
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.2e-30 139.4 705 27.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 4.9e-29 134.0 603 28.0
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 4.9e-29 134.0 674 26.6
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.1e-28 132.9 760 27.1
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.1e-28 131.0 320 37.5
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.6e-24 117.9 277 38.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 5.8e-22 110.5 542 26.6
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.9e-20 105.5 257 33.9
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 9.2e-20 103.2 227 36.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 4.6e-19 100.9 522 28.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 9.5e-17 93.2 625 26.7
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.1e-16 92.0 560 26.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 8.9e-15 86.7 625 25.6
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 1.2e-14 86.3 94 52.1
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 9.9e-14 83.2 654 25.8
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.3e-13 82.8 258 30.2
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 8.3e-13 80.1 540 26.1
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.9e-12 79.0 502 27.7
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.9e-12 79.0 527 27.5
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.9e-12 79.0 347 29.4
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 1.0e-10 73.2 581 24.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 3.9e-10 71.2 217 31.8
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 5.2e-07 60.8 476 25.2
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 4.4e-06 57.8 440 26.4
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 5.8e-06 57.4 118 41.5
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 5.8e-06 57.4 170 35.3


User provided reference genes

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