Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 6.2e-131 470.7 221 100.0
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 4.3e-124 448.0 221 95.5
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.9e-116 422.5 220 88.6
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.4e-111 405.6 227 86.3
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 4.5e-97 358.2 227 76.7
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.2e-94 350.1 235 74.9
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 6.9e-82 307.8 222 66.7
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.1e-76 290.4 227 62.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 7.4e-76 287.7 218 61.9
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 2.2e-75 286.2 224 64.3
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 4.5e-73 278.5 223 60.5
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 7.7e-73 277.7 225 60.9
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 7.7e-73 277.7 226 59.3
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 1.7e-72 276.6 227 59.0
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.9e-72 275.8 226 60.2
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 4.2e-71 271.9 223 58.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.2e-70 270.4 224 57.6
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 4.7e-70 268.5 227 59.0
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.3e-69 266.2 226 58.4
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 3.0e-69 265.8 225 57.8
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 8.8e-69 264.2 216 59.3
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.1e-68 263.8 227 56.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 4.4e-68 261.9 220 58.2
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 7.4e-68 261.2 224 55.8
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 7.4e-68 261.2 229 55.9
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.3e-67 260.4 222 56.8
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.2e-67 259.6 237 57.8
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 3.7e-67 258.8 216 61.1
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.1e-66 257.3 222 56.3
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.4e-66 256.9 226 54.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 3.1e-66 255.8 223 57.4
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 3.1e-66 255.8 222 57.7
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 4.1e-66 255.4 228 55.3
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 4.1e-66 255.4 231 55.0
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 5.3e-66 255.0 226 54.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 7.0e-66 254.6 227 55.9
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 2.0e-65 253.1 224 54.5
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.5e-65 252.3 217 58.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 4.5e-65 251.9 218 56.0
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 5.9e-65 251.5 218 58.7
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 5.9e-65 251.5 228 54.8
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 7.7e-65 251.1 226 56.2
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.0e-64 250.8 220 57.3
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 1.3e-64 250.4 223 56.5
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 8.5e-64 247.7 223 53.8
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.5e-63 246.9 227 55.1
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 2.5e-63 246.1 217 57.6
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 3.2e-63 245.7 250 53.2
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 4.2e-63 245.4 217 57.1
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.2e-62 243.8 218 56.9
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 2.7e-62 242.7 220 56.4
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 8.0e-62 241.1 228 55.7
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 8.0e-62 241.1 224 52.7
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.0e-61 240.7 217 55.3
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.0e-61 240.7 230 50.4
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.4e-61 240.4 217 54.8
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 2.3e-61 239.6 218 54.6
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 3.0e-61 239.2 218 54.6
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.6e-60 236.1 226 55.8
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 3.3e-60 235.7 220 55.9
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 5.7e-60 235.0 213 54.0
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 7.5e-60 234.6 226 52.2
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.3e-59 233.8 248 50.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.2e-59 233.0 230 54.3
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 3.7e-59 232.3 168 66.7
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 8.2e-59 231.1 230 52.2
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.4e-58 230.3 203 57.1
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 4.1e-58 228.8 218 53.7
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.6e-57 226.9 220 50.0
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 2.7e-57 226.1 189 57.7
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.7e-57 226.1 226 51.8
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 3.5e-57 225.7 209 52.2
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 7.7e-57 224.6 219 52.1
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.0e-56 224.2 224 51.8
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 2.2e-56 223.0 216 53.7
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 4.2e-55 218.8 227 45.4
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 7.2e-55 218.0 216 50.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.2e-55 218.0 142 70.4
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.2e-54 217.2 224 48.2
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.6e-54 216.9 224 46.9
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.4e-53 213.8 218 48.2
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 4.0e-53 212.2 217 47.9
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.2e-52 210.7 220 47.3
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.2e-52 210.7 205 51.2
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 7.5e-52 208.0 221 49.3
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.7e-51 206.8 146 68.5
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.8e-51 206.1 256 45.3
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.8e-50 203.4 211 49.8
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 8.5e-48 194.5 168 57.7
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 3.2e-47 192.6 226 46.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 9.5e-47 191.0 167 58.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.0e-44 183.3 207 46.4
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 4.7e-38 162.2 123 66.7
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.0e-36 156.8 161 49.7
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 5.7e-36 155.2 117 59.8
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.4e-34 150.6 185 41.1
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 9.2e-34 147.9 153 50.3
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.2e-33 147.5 189 39.2
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.0e-32 144.4 186 39.2
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.0e-32 144.4 109 65.1
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 7.0e-26 121.7 129 50.4
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 6.8e-21 105.1 123 46.3
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 2.0e-20 103.6 149 43.0
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.2e-19 100.1 94 54.3
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.3e-16 90.9 62 67.7
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 4.3e-15 85.9 218 29.4
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 3.1e-13 79.7 98 45.9
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 2.0e-12 77.0 98 45.9
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 2.6e-12 76.6 140 37.9
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 2.9e-11 73.2 103 42.7
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.4e-10 70.9 64 51.6
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 7.1e-10 68.6 97 40.2
Haze_03378 Corylus avellana HOM05D007112 ORTHO05D008930 2.1e-06 57.0 33 72.7


User provided reference genes

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