Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3610 Fragaria x ananassa HOM05D005470 ORTHO05D006855 5.8e-52 207.2 101 100.0
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 3.2e-34 148.3 74 98.6
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 3.2e-34 148.3 74 98.6
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 4.1e-29 131.3 73 90.4
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 9.4e-26 120.2 73 80.8
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 4.6e-25 117.9 73 80.8
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 1.4e-24 116.3 73 78.1
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 6.7e-24 114.0 73 72.6
CANSAT01G1736 Cannabis sativa HOM05D005470 ORTHO05D006855 6.7e-24 114.0 73 76.7
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 1.1e-23 113.2 73 72.6
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 1.1e-23 113.2 73 74.0
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 2.0e-23 112.5 73 72.6
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 2.0e-23 112.5 73 74.0
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 2.5e-23 112.1 73 72.6
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 2.5e-23 112.1 73 69.9
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 2.5e-23 112.1 75 70.7
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 2.5e-23 112.1 73 71.2
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 4.3e-23 111.3 79 73.4
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 5.7e-23 110.9 74 73.0
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 5.7e-23 110.9 75 68.0
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 7.4e-23 110.5 73 75.3
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 9.7e-23 110.2 75 68.0
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 1.3e-22 109.8 73 75.3
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 1.7e-22 109.4 73 71.2
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 1.7e-22 109.4 73 74.0
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 3.7e-22 108.2 73 72.6
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 3.7e-22 108.2 74 71.6
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 4.8e-22 107.8 75 68.0
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 4.8e-22 107.8 73 71.2
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 4.8e-22 107.8 75 72.0
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 4.8e-22 107.8 75 72.0
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 1.1e-21 106.7 79 65.8
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 1.1e-21 106.7 75 68.0
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 1.4e-21 106.3 73 71.2
Nn1g07786 Nelumbo nucifera HOM05D005470 ORTHO05D006855 1.4e-21 106.3 73 65.8
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.4e-21 106.3 75 68.0
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 1.8e-21 105.9 73 68.5
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 1.8e-21 105.9 73 69.9
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 1.8e-21 105.9 76 67.1
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 3.1e-21 105.1 73 69.9
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 4.1e-21 104.8 73 65.8
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 5.3e-21 104.4 75 72.0
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 5.3e-21 104.4 75 66.7
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 1.2e-20 103.2 78 69.2
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 1.2e-20 103.2 73 65.8
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.5e-20 102.8 73 64.4
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.5e-20 102.8 73 64.4
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 1.5e-20 102.8 73 64.4
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 2.0e-20 102.4 79 59.5
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 2.6e-20 102.1 75 65.3
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 3.4e-20 101.7 73 67.1
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 3.4e-20 101.7 75 68.0
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 4.5e-20 101.3 73 69.9
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 4.5e-20 101.3 74 67.6
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 4.5e-20 101.3 79 59.5
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 4.5e-20 101.3 73 68.5
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 5.9e-20 100.9 73 69.9
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 7.7e-20 100.5 76 61.8
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 7.7e-20 100.5 73 63.0
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 1.0e-19 100.1 73 68.5
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 1.0e-19 100.1 73 63.0
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.7e-19 99.4 79 57.0
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 1.7e-19 99.4 73 68.5
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 2.2e-19 99.0 73 63.0
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 2.9e-19 98.6 73 64.4
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 2.9e-19 98.6 73 65.8
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 5.0e-19 97.8 73 63.0
COL.COLO4_06654 Corchorus olitorius HOM05D005470 ORTHO05D006855 6.5e-19 97.4 66 68.2
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 6.5e-19 97.4 63 71.4
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 8.5e-19 97.1 73 65.8
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 8.5e-19 97.1 75 62.7
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 1.9e-18 95.9 73 63.0
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.9e-18 95.9 73 63.0
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 1.9e-18 95.9 73 64.4
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 2.5e-18 95.5 70 65.7
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 2.5e-18 95.5 73 61.6
ECA236G4489 Erigeron canadensis HOM05D005470 ORTHO05D006855 2.5e-18 95.5 73 64.4
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 2.5e-18 95.5 73 61.6
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 2.5e-18 95.5 77 58.4
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 2.5e-18 95.5 73 65.8
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 3.2e-18 95.1 73 61.6
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 5.5e-18 94.4 73 63.0
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 7.2e-18 94.0 79 58.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 7.2e-18 94.0 63 74.6
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 7.2e-18 94.0 73 64.4
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 2.1e-17 92.4 73 60.3
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 2.1e-17 92.4 73 60.3
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 2.7e-17 92.0 73 61.6
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 2.7e-17 92.0 73 63.0
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 7.9e-17 90.5 73 63.0
arahy.Tifrunner.gnm1.ann1.K5YBAW Arachis hypogaea HOM05D005470 ORTHO05D006855 1.0e-16 90.1 81 58.0
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 1.4e-16 89.7 73 60.3
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 2.3e-16 89.0 73 60.3
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 2.3e-16 89.0 62 67.7
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 5.1e-16 87.8 73 58.9
unitig_92.g28105 Utricularia gibba HOM05D005470 ORTHO05D006855 5.1e-16 87.8 76 57.9
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 6.7e-16 87.4 79 57.0
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 6.7e-16 87.4 82 62.2
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 6.7e-16 87.4 79 54.4
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 9.7e-15 83.6 77 53.2
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 2.2e-14 82.4 64 67.2
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 2.8e-14 82.0 73 54.8
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 6.3e-14 80.9 73 53.4
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 8.2e-14 80.5 74 50.0
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 1.6e-12 76.3 73 47.9
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.6e-12 75.5 73 49.3
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 3.5e-12 75.1 74 50.0
arahy.Tifrunner.gnm1.ann1.M1HUIQ Arachis hypogaea HOM05D005470 ORTHO05D006855 1.0e-11 73.6 55 63.6
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 1.5e-10 69.7 73 46.6
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 1.9e-10 69.3 70 45.7
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 9.4e-10 67.0 79 45.6
arahy.Tifrunner.gnm1.ann1.6Q4MDY Arachis hypogaea HOM05D005470 ORTHO05D038880 6.1e-09 64.3 86 41.9
TAR626G1714 Trochodendron aralioides HOM05D000428 ORTHO05D009311 4.8e-06 54.7 50 50.0


User provided reference genes

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