Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3593 Fragaria x ananassa HOM05D017226 ORTHO05D020714 2.6e-158 562.0 287 100.0
FAN24G0826 Fragaria x ananassa HOM05D017226 ORTHO05D020714 1.8e-138 496.1 286 90.2
FvH4_2g08090 Fragaria vesca HOM05D017226 ORTHO05D020714 5.2e-138 494.6 286 89.9
RcHm_v2.0_Chr0c38g0503051 Rosa chinensis HOM05D017226 ORTHO05D020714 8.9e-106 387.5 286 72.7
RcHm_v2.0_Chr0c38g0503081 Rosa chinensis HOM05D017226 ORTHO05D020714 1.5e-97 360.1 281 70.1
RcHm_v2.0_Chr6g0262581 Rosa chinensis HOM05D017226 ORTHO05D020714 1.5e-97 360.1 281 70.1
RcHm_v2.0_Chr6g0262601 Rosa chinensis HOM05D017226 ORTHO05D020714 7.7e-65 251.5 173 75.1
RcHm_v2.0_Chr6g0262771 Rosa chinensis HOM05D017226 ORTHO05D347534 7.0e-34 148.7 105 74.3
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 2.0e-17 94.0 231 32.0
RcHm_v2.0_Chr4g0395591 Rosa chinensis HOM05D001084 ORTHO05D020669 5.9e-17 92.4 273 30.4
RcHm_v2.0_Chr4g0419891 Rosa chinensis HOM05D001084 ORTHO05D020669 1.1e-15 88.2 275 29.5
RcHm_v2.0_Chr4g0420001 Rosa chinensis HOM05D001084 ORTHO05D020669 1.1e-15 88.2 273 29.7
Prupe.8G103700 Prunus persica HOM05D001084 ORTHO05D020669 3.6e-14 83.2 279 29.7
FvH4_2g08100 Fragaria vesca HOM05D001084 ORTHO05D022645 4.7e-14 82.8 280 28.2
FAN24G1400 Fragaria x ananassa HOM05D001084 ORTHO05D022645 1.4e-13 81.3 280 27.9
FAN06G4360 Fragaria x ananassa HOM05D001084 ORTHO05D020669 3.1e-13 80.1 170 32.4
FvH4_7g31862 Fragaria vesca HOM05D001084 ORTHO05D020669 2.0e-12 77.4 170 31.8
FAN15G2740 Fragaria x ananassa HOM05D001084 ORTHO05D022645 2.6e-12 77.0 230 28.3
Actinidia00499 Actinidia chinensis HOM05D001084 ORTHO05D001275 5.8e-12 75.9 291 26.1
Sabra04G0100300 Salix brachista HOM05D001084 ORTHO05D001275 9.8e-12 75.1 294 30.6
Nitab4.5_0004280g0090 Nicotiana tabacum HOM05D001084 ORTHO05D001275 1.7e-11 74.3 279 28.3
Nitab4.5_0012349g0020 Nicotiana tabacum HOM05D001084 ORTHO05D001275 1.7e-11 74.3 279 28.3
Peaxi162Scf00016g00102 Petunia axillaris HOM05D001084 ORTHO05D001275 4.9e-11 72.8 279 29.0
RcHm_v2.0_Chr0c38g0503041 Rosa chinensis HOM05D001084 ORTHO05D022645 8.3e-11 72.0 212 29.7
RcHm_v2.0_Chr6g0262781 Rosa chinensis HOM05D001084 ORTHO05D022645 1.4e-10 71.2 212 29.7
AUR62016703 Chenopodium quinoa HOM05D001084 ORTHO05D001275 2.4e-10 70.5 284 29.6
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.2e-10 70.1 284 28.9
Dinv26798 Davidia involucrata HOM05D001084 ORTHO05D001275 4.1e-10 69.7 307 29.3
FAN24G1401 Fragaria x ananassa HOM05D001084 ORTHO05D022670 7.0e-10 68.9 261 26.8
Lj5P200T42 Lonicera japonica HOM05D001084 ORTHO05D001275 7.0e-10 68.9 283 27.6
Potri.004G150800 Populus trichocarpa HOM05D001084 ORTHO05D001275 7.0e-10 68.9 286 28.3
FvH4_2g06181 Fragaria vesca HOM05D001084 ORTHO05D022670 2.0e-09 67.4 254 26.8
AUR62011358 Chenopodium quinoa HOM05D001084 ORTHO05D001275 2.7e-09 67.0 284 29.2
TWI75G0560 Tripterygium wilfordii HOM05D001084 ORTHO05D001275 3.5e-09 66.6 253 30.0
AT4G34330 Arabidopsis thaliana HOM05D001084 ORTHO05D001275 4.6e-09 66.2 269 27.5
RcHm_v2.0_Chr6g0262911 Rosa chinensis HOM05D001084 ORTHO05D022645 1.0e-08 65.1 225 28.9
Dinv39946 Davidia involucrata HOM05D001084 ORTHO05D001275 3.9e-08 63.2 264 27.7
Carub.0007s0603 Capsella rubella HOM05D001084 ORTHO05D001275 5.0e-08 62.8 227 30.0
Eucgr.I02475 Eucalyptus grandis HOM05D001084 ORTHO05D001275 6.6e-08 62.4 288 27.8
Glyma.16G141800 Glycine max HOM05D001084 ORTHO05D001275 6.6e-08 62.4 287 28.9
AUR62003196 Chenopodium quinoa HOM05D001084 ORTHO05D001275 1.9e-07 60.8 280 26.4
MD05G1070600 Malus domestica HOM05D001084 ORTHO05D001275 1.9e-07 60.8 285 28.1
QL06p044956 Quercus lobata HOM05D001084 ORTHO05D001275 1.9e-07 60.8 223 29.1
Aqoxy5G01705 Aquilegia oxysepala HOM05D001084 ORTHO05D001275 2.5e-07 60.5 261 27.6
Glyma.02G059100 Glycine max HOM05D001084 ORTHO05D001275 2.5e-07 60.5 287 28.2
Ca_12488_v3 Cicer arietinum L. HOM05D001084 ORTHO05D001275 3.3e-07 60.1 268 27.2
Ca_12493_v3 Cicer arietinum L. HOM05D001084 ORTHO05D001275 3.3e-07 60.1 268 27.2
Haze_15137 Corylus avellana HOM05D001084 ORTHO05D001275 3.3e-07 60.1 287 25.1
Gorai.013G052500 Gossypium raimondii HOM05D001084 ORTHO05D001275 4.3e-07 59.7 283 26.5
Oeu038871.1 Olea europaea HOM05D001084 ORTHO05D001275 4.3e-07 59.7 270 24.1
Phvul.003G010400 Phaseolus vulgaris HOM05D001084 ORTHO05D001275 4.3e-07 59.7 259 25.9
CiPaw.02G015000 Carya illinoinensis HOM05D001084 ORTHO05D001275 5.6e-07 59.3 283 26.5
COL.COLO4_32460 Corchorus olitorius HOM05D001084 ORTHO05D001275 5.6e-07 59.3 282 27.3
Gohir.A13G048400 Gossypium hirsutum HOM05D001084 ORTHO05D001275 5.6e-07 59.3 283 26.9
Lsat_1_v5_gn_4_175700 Lactuca sativa HOM05D001084 ORTHO05D001275 5.6e-07 59.3 289 24.2
Migut.H00526 Erythranthe guttata HOM05D001084 ORTHO05D001275 7.3e-07 58.9 286 28.7
Thhalv10022714m.g Eutrema salsugineum HOM05D001084 ORTHO05D001275 7.3e-07 58.9 230 27.8
Cfa004264 Carpinus fangiana HOM05D001084 ORTHO05D001275 9.5e-07 58.5 286 24.8
AUR62008013 Chenopodium quinoa HOM05D001084 ORTHO05D001275 9.5e-07 58.5 280 26.4
CAN.G322.110 Capsicum annuum HOM05D001084 ORTHO05D001275 1.2e-06 58.2 279 25.8
CDE02G2454 Ceratophyllum demersum HOM05D001084 ORTHO05D001275 1.2e-06 58.2 304 26.0
Gohir.A03G180000 Gossypium hirsutum HOM05D001084 ORTHO05D001275 1.2e-06 58.2 263 28.1
PGSC0003DMG400025185 Solanum tuberosum HOM05D001084 ORTHO05D001275 1.2e-06 58.2 279 26.2
Thecc.02G122100 Theobroma cacao HOM05D001084 ORTHO05D001275 1.2e-06 58.2 282 27.7
ECA236G2604 Erigeron canadensis HOM05D001084 ORTHO05D001275 1.6e-06 57.8 285 25.3
Oeu021893.2 Olea europaea HOM05D001084 ORTHO05D001275 1.6e-06 57.8 260 26.2
Oeu021894.1 Olea europaea HOM05D001084 ORTHO05D001275 1.6e-06 57.8 260 26.2
CsaV3_7G023240 Cucumis sativus L. HOM05D001084 ORTHO05D001275 2.1e-06 57.4 285 27.0
Gohir.D13G046800 Gossypium hirsutum HOM05D001084 ORTHO05D001275 2.1e-06 57.4 283 26.1
Lalb_Chr09g0322661 Lupinus albus HOM05D001084 ORTHO05D001275 2.1e-06 57.4 280 22.9
Ca_24831_v3 Cicer arietinum L. HOM05D001084 ORTHO05D001275 3.6e-06 56.6 282 26.6
Hma1.2p1_0652F.1_g195940 Hydrangea macrophylla HOM05D001084 ORTHO05D001275 3.6e-06 56.6 282 27.3
Solyc01g109380.3 Solanum lycopersicum HOM05D001084 ORTHO05D001275 3.6e-06 56.6 279 25.4
TPR.G20277 Trifolium pratense HOM05D001084 ORTHO05D001275 3.6e-06 56.6 235 29.4
EL10Ac6g14896 Beta vulgaris HOM05D001084 ORTHO05D001275 4.7e-06 56.2 257 26.1
Sopen01g051570 Solanum pennellii HOM05D001084 ORTHO05D001275 4.7e-06 56.2 287 25.8
Psat4g091120 Pisum sativum HOM05D001084 ORTHO05D001275 6.2e-06 55.8 230 27.4
Sp3g32120 Schrenkiella parvula HOM05D001084 ORTHO05D001275 6.2e-06 55.8 251 27.5
Migut.O00626 Erythranthe guttata HOM05D001084 ORTHO05D001275 8.0e-06 55.5 257 25.7
Glyma.11G120500 Glycine max HOM05D001084 ORTHO05D001275 8.0e-06 55.5 259 27.4
Hma1.2p1_0066F.1_g036730 Hydrangea macrophylla HOM05D001084 ORTHO05D001275 8.0e-06 55.5 267 27.0
Lj3g0009377 Lotus japonicus HOM05D001084 ORTHO05D001275 8.0e-06 55.5 288 26.4
MD15G1269200 Malus domestica HOM05D001084 ORTHO05D001275 8.0e-06 55.5 283 24.7
Manes.15G148300 Manihot esculenta HOM05D001084 ORTHO05D001275 8.0e-06 55.5 259 26.6
Sc18g0004680 Simmondsia chinensis HOM05D001084 ORTHO05D001275 8.0e-06 55.5 284 26.8


User provided reference genes

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