Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.6e-181 637.1 338 100.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.4e-165 585.1 339 93.2
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.8e-156 555.1 338 91.1
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.5e-149 531.9 332 88.9
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.9e-148 528.9 330 88.8
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 4.5e-141 505.0 327 83.2
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 5.2e-137 491.5 330 83.6
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 7.0e-110 401.4 324 68.8
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 7.5e-104 381.3 325 66.8
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 6.4e-71 271.9 338 53.8
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 5.5e-70 268.9 336 53.6
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 9.3e-70 268.1 330 53.0
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.2e-69 267.7 329 52.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.2e-69 267.7 328 51.2
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.7e-69 266.5 334 53.0
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 7.9e-69 265.0 326 53.1
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 3.0e-68 263.1 334 52.7
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 3.9e-68 262.7 336 53.6
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 5.1e-68 262.3 326 52.1
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.1e-68 262.3 333 52.6
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 8.7e-68 261.5 334 52.4
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 7.4e-67 258.5 326 51.5
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 2.1e-66 256.9 328 51.8
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 2.4e-65 253.4 326 51.5
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 3.8e-63 246.1 327 49.8
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 4.9e-63 245.7 330 50.6
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 6.5e-63 245.4 328 50.6
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 5.5e-62 242.3 310 51.6
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.8e-60 237.3 341 49.6
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 5.1e-60 235.7 392 45.4
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 5.7e-59 232.3 347 48.4
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 6.3e-58 228.8 325 48.3
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 3.1e-57 226.5 333 48.6
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 6.9e-57 225.3 336 48.5
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.0e-56 223.8 311 49.8
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.0e-56 223.8 312 48.4
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 2.5e-54 216.9 343 43.4
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 2.5e-54 216.9 330 46.4
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.2e-54 216.1 331 45.9
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.2e-53 214.5 343 46.4
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.6e-53 214.2 333 43.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 6.3e-50 202.2 338 43.5
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.1e-49 201.4 308 47.4
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 2.4e-49 200.3 348 45.7
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 9.1e-49 198.4 340 42.1
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 1.1e-46 191.4 335 43.6
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.9e-46 190.7 333 42.3
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.2e-45 188.0 333 41.7
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 7.9e-45 185.3 371 39.1
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.0e-44 184.9 365 40.0
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 3.7e-42 176.4 333 41.7
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 3.1e-41 173.3 290 44.8
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 6.9e-41 172.2 314 40.4
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-40 171.4 326 43.6
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 2.0e-40 170.6 317 38.8
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.8e-39 166.4 331 42.3
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 2.5e-38 163.7 403 37.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.2e-38 163.3 296 45.6
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 4.2e-38 162.9 327 42.8
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 5.5e-38 162.5 314 40.8
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 7.2e-38 162.2 125 79.2
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.6e-37 161.0 350 39.1
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.6e-37 161.0 326 42.9
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.6e-37 159.8 328 39.0
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 4.7e-37 159.5 334 37.4
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 1.1e-35 154.8 332 40.4
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.1e-35 154.8 363 39.4
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.5e-35 154.5 242 43.4
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.5e-35 154.5 332 40.4
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.3e-34 151.4 334 42.2
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.7e-34 151.0 331 39.3
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 8.2e-34 148.7 329 39.5
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.4e-33 147.9 359 37.0
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 7.0e-33 145.6 235 42.1
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 9.1e-33 145.2 334 39.2
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 4.5e-32 142.9 333 37.5
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 2.2e-31 140.6 330 38.2
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 6.5e-31 139.0 333 38.1
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.5e-30 137.1 329 40.1
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.6e-29 134.4 339 37.5
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.7e-29 133.7 329 37.1
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.4e-28 131.3 269 43.9
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.8e-28 131.0 332 34.9
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.5e-27 127.9 144 52.8
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.0e-27 127.5 333 35.7
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 4.4e-27 126.3 336 36.0
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 5.7e-27 125.9 189 43.9
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 2.2e-26 124.0 241 41.9
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.8e-26 123.6 311 36.3
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 6.3e-26 122.5 303 36.0
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 6.3e-26 122.5 328 39.0
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.1e-25 121.7 166 45.8
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.4e-25 121.3 208 44.7
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 4.1e-25 119.8 326 35.3
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 1.2e-24 118.2 331 34.4
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 1.6e-24 117.9 329 37.1
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.2e-23 114.0 327 35.8
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.2e-23 114.0 352 35.5
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 3.8e-23 113.2 329 37.7
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 5.0e-23 112.8 99 63.6
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.5e-22 111.3 329 38.3
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 4.2e-22 109.8 328 38.1
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 7.2e-22 109.0 330 37.6
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.1e-21 107.5 298 33.6
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 2.1e-21 107.5 332 34.3
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 2.7e-21 107.1 313 37.1
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 2.7e-21 107.1 322 33.2
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.0e-20 105.1 227 40.1
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.2e-19 101.7 292 34.2
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.4e-19 100.1 330 33.0
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 7.5e-19 99.0 330 35.2
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.0e-17 92.4 144 44.4
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 9.1e-17 92.0 307 34.5
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 8.6e-15 85.5 200 35.0
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 4.2e-14 83.2 329 32.8
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 3.0e-12 77.0 322 32.9
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 4.0e-12 76.6 222 36.0
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 8.9e-12 75.5 234 37.6
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 8.9e-12 75.5 255 31.8
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 8.9e-12 75.5 268 31.0
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 1.2e-08 65.1 124 40.3
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 3.8e-07 60.1 66 54.5


User provided reference genes

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