Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.5e-245 852.4 433 100.0
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.9e-232 808.9 429 95.6
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 1.8e-230 802.4 433 93.3
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.0e-193 680.2 445 80.0
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 2.3e-190 669.1 439 77.0
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.3e-185 653.3 428 76.6
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 3.8e-185 651.7 430 75.8
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 1.5e-184 649.8 403 78.7
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 2.5e-184 649.0 443 73.4
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.6e-183 645.2 443 72.9
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.0e-182 643.7 444 74.5
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 5.2e-182 641.3 443 73.4
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 2.0e-181 639.4 431 74.5
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 5.7e-181 637.9 433 74.1
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.3e-180 636.7 433 73.2
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.7e-180 636.3 433 73.9
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 3.1e-179 632.1 439 73.3
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 5.4e-179 631.3 419 75.2
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 9.1e-179 630.6 433 72.1
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.2e-178 630.2 432 73.1
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 2.7e-178 629.0 434 73.7
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 5.9e-178 627.9 444 72.3
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 7.7e-178 627.5 433 72.7
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 3.8e-177 625.2 406 75.4
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 6.6e-177 624.4 444 71.6
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 8.6e-177 624.0 416 74.8
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.5e-176 622.5 433 72.5
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 7.2e-176 620.9 323 97.2
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.0e-174 617.1 423 73.5
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 1.4e-174 616.7 438 71.9
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 1.8e-174 616.3 442 71.5
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 4.0e-174 615.1 415 74.5
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 5.2e-174 614.8 413 73.4
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 5.2e-174 614.8 431 72.6
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 1.5e-173 613.2 431 72.4
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 2.0e-173 612.8 424 74.5
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 2.0e-173 612.8 433 71.8
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 3.4e-173 612.1 438 71.5
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 4.4e-173 611.7 425 72.0
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 4.4e-173 611.7 433 71.6
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 5.7e-173 611.3 427 72.6
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 7.5e-173 610.9 423 72.1
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 7.5e-173 610.9 439 70.2
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 1.3e-172 610.1 430 71.2
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.3e-172 610.1 412 74.3
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.3e-172 610.1 444 70.7
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.7e-172 609.8 432 71.8
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.1e-171 607.1 436 70.4
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.4e-171 606.7 430 70.9
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 1.8e-171 606.3 431 71.2
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.0e-171 604.4 427 71.9
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 9.2e-171 604.0 424 71.9
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.6e-170 603.2 443 70.2
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.7e-170 602.4 454 68.5
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.0e-169 600.5 434 70.3
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 8.6e-169 597.4 405 73.1
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 1.1e-168 597.0 421 69.6
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 3.3e-168 595.5 430 69.3
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 3.3e-168 595.5 407 73.7
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 4.3e-168 595.1 419 70.9
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 5.6e-168 594.7 411 72.7
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 5.6e-168 594.7 412 71.8
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 7.3e-168 594.3 395 74.9
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 9.5e-168 594.0 404 74.5
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 4.7e-167 591.7 415 70.4
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 3.1e-166 589.0 430 70.2
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 3.4e-165 585.5 440 69.1
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 4.4e-165 585.1 440 69.3
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 4.9e-164 581.6 451 65.2
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.1e-163 580.5 429 69.0
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 7.0e-163 577.8 411 70.3
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 9.2e-163 577.4 490 62.4
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.7e-161 573.2 421 67.9
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 5.0e-161 571.6 426 68.8
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 5.0e-161 571.6 521 59.3
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 8.6e-161 570.9 383 72.8
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 1.9e-160 569.7 433 66.7
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.9e-160 569.7 431 67.5
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 2.5e-160 569.3 386 72.3
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 9.5e-160 567.4 408 68.9
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 2.1e-159 566.2 394 70.1
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 2.6e-157 559.3 408 70.6
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 3.4e-157 558.9 434 66.6
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 7.5e-157 557.8 435 65.5
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 7.5e-157 557.8 435 65.5
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 4.6e-154 548.5 401 68.3
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 3.0e-153 545.8 392 67.9
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.3e-152 542.3 375 73.1
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.8e-151 539.3 375 69.9
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 3.1e-150 535.8 356 76.7
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 9.9e-149 530.8 365 73.4
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.4e-142 510.4 395 64.6
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.2e-142 508.4 366 72.4
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 2.2e-140 503.1 415 61.2
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 7.3e-136 488.0 411 60.6
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.4e-131 473.0 335 78.8
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 3.3e-128 462.6 419 59.4
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 8.1e-127 458.0 390 59.0
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 4.0e-126 455.7 324 69.1
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.9e-120 436.8 409 58.7
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.1e-118 431.0 227 99.1
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 5.8e-117 425.2 323 67.5
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 1.1e-112 411.0 348 65.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 3.3e-112 409.5 394 54.8
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 3.1e-110 402.9 297 66.0
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 4.5e-101 372.5 252 75.0
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 4.1e-94 349.4 385 50.1
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 1.2e-90 337.8 223 78.9
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 7.9e-90 335.1 219 74.0
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 4.5e-77 292.7 379 45.4
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 1.9e-67 260.8 381 39.9
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.4e-54 216.1 154 70.8
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 6.2e-50 202.6 120 80.8
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.4e-46 190.7 138 71.0
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.2e-46 188.7 112 80.4
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.0e-45 186.0 138 69.6
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-43 181.8 138 68.1
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.8e-40 169.5 82 97.6
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.6e-36 156.0 104 79.8
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 5.2e-33 146.4 127 60.6
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 4.1e-30 136.7 89 74.2
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 1.2e-29 135.2 89 73.0
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 7.6e-24 115.9 67 82.1
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 5.4e-22 109.8 82 69.5
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.2e-21 108.6 86 59.3
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.3e-20 105.1 70 65.7
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 4.8e-18 96.7 128 47.7
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 4.0e-17 93.6 49 83.7
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 3.4e-16 90.5 130 46.2
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 5.8e-16 89.7 244 37.7
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 1.0e-12 79.0 51 74.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 2.5e-11 74.3 43 69.8
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 6.2e-10 69.7 41 75.6


User provided reference genes

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