Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.2e-54 214.9 117 100.0
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-22 110.2 129 58.1
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 8.0e-21 104.0 131 55.7
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-20 103.6 135 54.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-20 103.6 131 55.0
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-20 103.2 125 58.4
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 7.0e-17 90.9 150 46.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.3e-15 86.7 71 74.6
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 3.9e-15 85.1 86 61.6
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.1e-15 84.7 83 65.1
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.9e-14 82.8 80 63.8
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 2.5e-14 82.4 86 61.6
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.5e-14 82.4 83 61.4
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 3.3e-14 82.0 80 62.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 5.6e-14 81.3 95 55.8
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 2.1e-13 79.3 83 60.2
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.6e-13 78.6 83 56.6
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 4.7e-13 78.2 140 42.9
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 6.2e-13 77.8 135 45.9
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 8.1e-13 77.4 103 49.5
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.8e-12 76.3 79 59.5
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.8e-12 76.3 105 50.5
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.3e-12 75.9 68 66.2
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.3e-12 75.9 88 53.4
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.3e-12 75.9 137 43.8
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 4.0e-12 75.1 136 44.9
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 5.2e-12 74.7 131 42.7
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 6.8e-12 74.3 136 40.4
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 8.9e-12 73.9 142 40.1
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 8.9e-12 73.9 100 50.0
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 8.9e-12 73.9 136 39.7
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 8.9e-12 73.9 83 57.8
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.2e-11 73.6 83 59.0
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.5e-11 73.2 85 54.1
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.5e-11 73.2 138 44.2
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 2.0e-11 72.8 129 38.8
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 2.0e-11 72.8 129 38.8
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.0e-11 72.8 100 48.0
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 2.6e-11 72.4 136 41.9
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 3.4e-11 72.0 129 38.8
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 3.4e-11 72.0 129 39.5
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 3.4e-11 72.0 77 59.7
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 4.4e-11 71.6 83 57.8
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 7.5e-11 70.9 83 54.2
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 7.5e-11 70.9 144 42.4
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.5e-11 70.9 136 41.2
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.3e-10 70.1 138 42.8
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.3e-10 70.1 82 53.7
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.7e-10 69.7 83 53.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.2e-10 69.3 82 54.9
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 2.2e-10 69.3 82 54.9
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 2.9e-10 68.9 67 59.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.9e-10 68.9 85 50.6
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.9e-10 68.9 138 38.4
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.7e-10 68.6 128 39.8
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.7e-10 68.6 68 60.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.7e-10 68.6 86 52.3
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 3.7e-10 68.6 66 62.1
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 3.7e-10 68.6 137 39.4
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 6.4e-10 67.8 132 40.2
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 8.3e-10 67.4 101 43.6
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 8.3e-10 67.4 83 51.8
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 1.1e-09 67.0 102 44.1
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.4e-09 66.6 86 52.3
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.9e-09 66.2 72 55.6
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.9e-09 66.2 77 55.8
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 4.1e-09 65.1 91 48.4
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 4.1e-09 65.1 126 36.5
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 4.1e-09 65.1 126 36.5
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 5.4e-09 64.7 86 47.7
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 5.4e-09 64.7 142 39.4
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 7.1e-09 64.3 78 50.0
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 9.2e-09 63.9 139 38.8
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 9.2e-09 63.9 98 43.9
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.2e-08 63.5 131 39.7
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.2e-08 63.5 79 55.7
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.6e-08 63.2 136 39.0
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 2.1e-08 62.8 83 51.8
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.7e-08 62.4 78 48.7
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.5e-08 62.0 136 39.7
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 4.6e-08 61.6 76 52.6
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 7.8e-08 60.8 78 51.3
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.0e-07 60.5 86 45.3
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.0e-07 60.5 72 50.0
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.7e-07 59.7 85 45.9
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.9e-07 58.5 72 54.2
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 6.6e-07 57.8 70 52.9
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.5e-06 56.6 80 46.2
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 1.9e-06 56.2 75 44.0
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 2.5e-06 55.8 80 53.8
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 7.3e-06 54.3 106 39.6
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 7.3e-06 54.3 71 47.9


User provided reference genes

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