Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.5e-242 842.4 419 100.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 5.3e-232 807.4 419 96.4
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.5e-207 726.1 426 87.1
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.2e-170 603.6 424 70.8
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.1e-160 570.5 422 70.6
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 2.1e-151 539.7 430 64.9
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.1e-150 535.0 340 83.8
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 3.3e-149 532.3 422 65.4
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.4e-147 526.9 429 61.8
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 3.2e-144 515.8 420 63.1
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 7.8e-143 511.1 426 62.0
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.0e-142 510.8 429 63.2
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.2e-140 503.8 419 62.1
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.2e-140 503.8 419 59.9
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 8.1e-140 501.1 424 60.1
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 9.0e-139 497.7 430 59.3
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.2e-138 497.3 424 59.7
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.5e-138 496.9 426 61.3
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.6e-138 496.1 410 61.2
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 2.6e-138 496.1 429 58.5
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 2.6e-138 496.1 420 60.5
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 4.4e-138 495.4 433 58.9
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.3e-137 493.8 424 59.7
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.2e-137 493.0 425 61.9
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.1e-136 490.7 546 52.4
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.4e-136 489.6 422 59.0
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.7e-135 486.1 447 55.9
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 6.0e-135 485.0 427 58.1
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.0e-134 484.2 418 58.4
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 7.3e-133 478.0 442 55.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.3e-132 477.2 407 58.5
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.1e-131 472.6 479 54.9
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 2.0e-130 469.9 438 56.6
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 4.5e-130 468.8 428 57.2
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 7.6e-130 468.0 427 55.5
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.2e-129 466.5 423 55.6
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 8.4e-129 464.5 430 56.7
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.1e-128 464.2 430 57.0
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.9e-128 463.4 424 54.5
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 7.1e-128 461.5 431 57.8
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 2.1e-127 459.9 422 56.2
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 3.5e-127 459.1 405 58.8
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 7.9e-127 458.0 431 55.2
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 7.9e-127 458.0 436 56.9
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.0e-126 457.6 431 56.8
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.8e-126 456.8 430 58.6
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.8e-126 456.8 424 53.8
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.8e-126 456.8 422 57.1
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 6.7e-126 454.9 426 57.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 8.7e-126 454.5 435 56.6
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 8.7e-126 454.5 436 56.9
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 3.3e-125 452.6 420 58.1
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 3.3e-125 452.6 444 55.2
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 5.6e-125 451.8 433 55.0
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 2.1e-124 449.9 422 58.1
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.1e-123 446.0 454 53.3
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.1e-123 446.0 454 53.3
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 7.6e-122 441.4 436 55.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.4e-120 436.4 377 60.7
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 5.5e-120 435.3 425 53.6
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.6e-119 433.7 384 59.1
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 4.6e-119 432.2 460 51.7
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 3.0e-118 429.5 437 50.6
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 5.1e-118 428.7 382 56.8
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 1.5e-117 427.2 419 53.0
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.9e-117 426.8 427 55.3
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.5e-117 426.4 423 52.7
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 3.3e-117 426.0 421 53.2
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 5.3e-115 418.7 430 55.3
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 5.3e-115 418.7 417 51.1
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 1.2e-114 417.5 417 51.1
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 2.0e-114 416.8 425 52.0
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 2.6e-114 416.4 422 54.3
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 4.5e-114 415.6 420 51.0
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 5.8e-114 415.2 333 61.6
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 3.8e-113 412.5 425 49.4
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 7.1e-112 408.3 418 50.0
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 6.0e-111 405.2 403 50.1
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 4.3e-109 399.1 416 50.7
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 3.7e-108 396.0 424 49.8
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 4.1e-107 392.5 387 52.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 3.0e-102 376.3 438 48.9
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.9e-101 373.6 426 48.1
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.2e-100 370.2 341 55.1
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.8e-99 367.1 442 47.5
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 9.1e-99 364.8 448 46.4
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.7e-97 360.5 352 52.6
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.4e-96 357.5 366 56.3
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.3e-94 350.1 333 53.8
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 1.1e-91 341.3 376 49.5
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 1.3e-89 334.3 426 44.6
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 9.1e-83 311.6 405 42.2
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 5.9e-82 308.9 438 41.8
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.5e-80 303.5 432 40.0
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.8e-75 287.3 355 44.5
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 7.0e-75 285.4 166 91.6
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.0e-73 281.6 296 47.3
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 6.5e-73 278.9 355 46.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.2e-63 248.1 280 48.9
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 2.8e-55 220.3 195 56.4
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 8.9e-54 215.3 224 57.6
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.4e-53 213.4 197 50.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 4.9e-44 183.0 408 29.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 7.8e-42 175.6 217 43.8
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 7.8e-42 175.6 230 43.9
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 4.2e-27 126.7 162 44.4
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 3.3e-24 117.1 86 61.6
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 7.1e-19 99.4 146 43.2
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 1.1e-14 85.5 62 61.3
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.2e-13 82.0 252 28.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 6.4e-12 76.3 92 54.3
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 6.7e-09 66.2 51 64.7
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.1e-08 65.5 56 57.1


User provided reference genes

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