Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.1e-73 279.6 225 100.0
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.8e-62 241.9 263 79.8
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.4e-60 235.7 263 78.3
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-57 227.3 263 77.2
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.1e-55 220.7 263 76.4
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.3e-55 219.2 263 76.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 2.4e-45 186.4 248 69.4
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-29 134.4 262 52.7
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.1e-29 134.4 262 52.7
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 1.8e-29 133.7 250 60.0
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.4e-29 133.3 262 52.7
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 6.9e-29 131.7 263 56.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.6e-28 129.8 250 56.0
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 3.6e-25 119.4 249 60.2
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 4.6e-25 119.0 215 65.6
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 6.7e-24 115.2 262 52.7
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 2.5e-23 113.2 254 55.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 3.3e-23 112.8 250 52.0
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 7.4e-23 111.7 262 50.8
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 9.7e-23 111.3 263 52.1
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.3e-22 110.9 94 61.7
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.7e-22 110.5 101 61.4
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 2.8e-22 109.8 262 57.3
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 4.8e-22 109.0 263 54.4
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 4.8e-22 109.0 260 53.8
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.4e-20 102.8 172 72.1
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.0e-19 101.3 263 48.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 1.3e-19 100.9 264 48.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 1.3e-19 100.9 263 49.8
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.3e-19 100.9 248 57.7
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.3e-19 100.9 264 49.2
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 2.9e-19 99.8 263 56.3
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 6.5e-19 98.6 264 46.2
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 8.5e-19 98.2 264 56.1
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.9e-18 97.1 90 60.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.9e-18 97.1 244 54.1
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 3.2e-18 96.3 90 60.0
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.2e-18 96.3 99 57.6
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 9.4e-18 94.7 164 67.1
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.2e-17 94.4 249 54.6
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.1e-17 93.6 263 51.0
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 6.1e-17 92.0 263 45.6
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.0e-16 91.3 247 53.8
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.0e-16 89.7 87 58.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 6.7e-16 88.6 171 58.5
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.1e-15 87.8 261 46.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.0e-15 87.0 91 57.1
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 2.6e-15 86.7 248 46.8
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.6e-15 86.7 256 53.9
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 3.3e-15 86.3 263 49.0
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 2.2e-14 83.6 263 44.9
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 2.8e-14 83.2 257 48.6
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 3.7e-14 82.8 264 51.1
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 4.8e-14 82.4 263 50.6
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 4.8e-14 82.4 87 56.3
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 6.3e-14 82.0 263 38.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 6.3e-14 82.0 85 56.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 8.2e-14 81.6 91 51.6
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 8.2e-14 81.6 244 52.9
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 1.1e-13 81.3 264 46.6
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.1e-13 81.3 157 66.2
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.1e-13 81.3 265 53.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.1e-13 81.3 106 50.9
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.1e-13 81.3 239 54.8
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.8e-13 80.5 85 50.6
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 3.1e-13 79.7 265 50.2
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 4.1e-13 79.3 82 57.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 5.3e-13 79.0 263 49.8
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-12 77.8 263 49.0
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 1.2e-12 77.8 80 57.5
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.6e-12 77.4 247 47.4
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 2.0e-12 77.0 256 50.0
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.6e-12 76.6 252 46.0
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 7.7e-12 75.1 172 66.3
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 7.7e-12 75.1 89 52.8
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 7.7e-12 75.1 89 52.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.8e-11 72.8 240 51.2
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 5.0e-11 72.4 249 51.4
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.1e-10 71.2 263 47.9
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 2.5e-10 70.1 249 50.6
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 9.4e-10 68.2 76 50.0
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 8.0e-09 65.1 244 55.3
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.4e-08 64.3 79 48.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 2.3e-08 63.5 91 42.9
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.0e-08 63.2 267 47.2
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 5.2e-08 62.4 197 56.9
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.1e-07 61.2 246 46.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 9.7e-07 58.2 235 47.7
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.7e-06 57.4 262 48.5
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 2.2e-06 57.0 97 39.2
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.2e-06 57.0 264 42.8
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 4.8e-06 55.8 263 51.0


User provided reference genes

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