Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 8.8e-99 363.6 182 100.0
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.5e-95 352.8 182 97.3
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 5.0e-94 347.8 182 95.6
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 5.0e-94 347.8 182 95.6
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 2.0e-87 325.9 182 89.6
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 2.2e-86 322.4 182 89.0
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 2.9e-86 322.0 182 89.6
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 5.7e-74 281.2 182 76.9
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.8e-73 278.1 184 77.2
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 5.4e-72 274.6 185 77.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 9.1e-72 273.9 184 75.5
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.7e-70 269.6 183 77.6
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.2e-70 269.2 182 74.2
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.2e-70 269.2 183 77.0
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.9e-70 268.9 184 76.1
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 8.5e-70 267.3 183 76.5
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.5e-69 266.5 184 75.0
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.5e-69 266.5 183 76.5
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 3.2e-69 265.4 182 75.8
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.5e-69 264.6 182 73.6
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 5.5e-69 264.6 184 77.2
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 7.2e-69 264.2 182 73.6
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 9.4e-69 263.8 182 75.8
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 9.4e-69 263.8 182 75.3
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.6e-68 263.1 182 74.7
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 3.6e-68 261.9 183 74.3
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 4.7e-68 261.5 182 74.2
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 4.7e-68 261.5 182 74.2
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 8.0e-68 260.8 182 74.2
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 1.0e-67 260.4 182 74.7
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.4e-67 260.0 183 73.8
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.8e-67 259.6 185 73.0
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 3.0e-67 258.8 166 78.3
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 3.0e-67 258.8 186 72.0
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 4.0e-67 258.5 183 72.1
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 6.8e-67 257.7 182 72.0
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 8.8e-67 257.3 183 72.7
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 3.4e-66 255.4 183 73.8
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 5.7e-66 254.6 185 71.4
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 5.7e-66 254.6 182 71.4
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 7.5e-66 254.2 182 72.5
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 8.3e-65 250.8 183 70.5
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.1e-64 250.4 182 70.9
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.8e-64 249.6 182 73.1
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 7.0e-64 247.7 182 72.0
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 9.2e-64 247.3 182 71.4
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 2.0e-63 246.1 184 72.8
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 3.5e-63 245.4 187 70.6
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.3e-62 243.4 182 72.5
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 5.0e-62 241.5 157 75.8
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 8.6e-62 240.7 158 77.2
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 2.5e-61 239.2 184 67.4
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.5e-61 239.2 182 69.8
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 3.3e-61 238.8 182 69.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 5.6e-61 238.0 182 70.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 7.3e-61 237.7 182 70.3
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 9.5e-61 237.3 184 68.5
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 2.8e-60 235.7 182 68.7
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 6.1e-60 234.6 152 77.0
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.8e-59 233.0 186 66.7
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.8e-59 233.0 189 66.7
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.8e-59 233.0 183 66.1
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.3e-59 232.6 183 67.8
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.3e-59 232.6 183 69.9
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.2e-58 230.3 182 68.1
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.2e-58 230.3 182 68.1
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.2e-58 230.3 185 67.0
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 1.2e-58 230.3 183 68.9
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.5e-58 229.9 145 77.9
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 3.4e-58 228.8 183 69.9
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 4.4e-58 228.4 182 67.0
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 5.7e-58 228.0 172 69.8
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 2.9e-57 225.7 182 68.7
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 8.3e-57 224.2 181 64.1
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 4.1e-56 221.9 183 67.2
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 9.2e-56 220.7 201 59.7
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 4.6e-55 218.4 116 90.5
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 7.8e-55 217.6 146 71.9
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.0e-54 217.2 182 63.2
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.0e-54 217.2 182 63.2
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 5.0e-54 214.9 182 62.6
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.9e-53 213.0 132 78.8
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.9e-53 213.0 162 66.0
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 4.3e-53 211.8 114 86.8
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.1e-52 209.5 116 87.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.1e-52 209.5 152 65.1
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 4.7e-52 208.4 184 60.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 4.7e-52 208.4 156 66.0
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.7e-52 208.4 179 66.5
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.0e-51 207.2 115 83.5
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.8e-51 206.5 157 64.3
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 2.3e-51 206.1 182 61.5
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.1e-51 205.7 163 64.4
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 4.0e-51 205.3 183 59.6
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 4.0e-51 205.3 183 59.6
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 8.9e-51 204.1 158 64.6
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 8.9e-51 204.1 184 58.2
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-50 203.8 157 63.1
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 2.0e-50 203.0 187 59.4
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.6e-50 202.6 185 58.4
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 3.4e-50 202.2 185 58.4
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.4e-50 201.8 179 59.2
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.4e-50 201.8 182 61.0
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 5.8e-50 201.4 140 71.4
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 7.5e-50 201.1 154 63.6
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 7.5e-50 201.1 182 62.6
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 9.8e-50 200.7 183 58.5
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 1.3e-49 200.3 184 58.7
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.2e-49 199.5 118 78.8
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.9e-49 199.1 179 59.8
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.4e-48 196.8 151 64.9
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 3.2e-48 195.7 115 80.9
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 3.0e-46 189.1 151 62.3
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 1.9e-45 186.4 103 91.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.2e-42 177.2 124 66.9
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.7e-41 173.3 108 73.1
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.9e-41 172.6 115 71.3
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 4.9e-41 171.8 124 63.7
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 7.3e-37 157.9 117 60.7
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 2.1e-36 156.4 131 63.4
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 3.1e-35 152.5 110 60.0
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 4.4e-34 148.7 106 61.3
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 5.8e-34 148.3 108 61.1
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.8e-26 121.7 170 45.9
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 9.6e-21 104.4 59 79.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 9.6e-21 104.4 59 79.7
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.4e-19 99.8 68 73.5
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.2e-18 97.4 112 54.5
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.8e-14 83.6 49 79.6
GSVIVG01012373001 Vitis vinifera HOM05D001155 ORTHO05D001080 5.1e-06 55.5 130 33.8


User provided reference genes

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