Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.3e-283 977.2 466 100.0
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.4e-265 919.1 456 96.9
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.0e-264 915.2 453 96.7
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.2e-261 906.0 453 96.0
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.9e-261 903.3 456 95.2
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 4.6e-237 824.3 461 86.8
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 7.7e-208 727.2 460 77.6
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 2.0e-163 579.7 457 63.2
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.8e-157 558.5 459 61.4
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.9e-154 548.5 472 60.2
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-153 546.2 470 59.1
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.2e-153 545.4 465 58.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.3e-151 539.7 454 57.9
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.0e-151 539.3 463 59.0
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.1e-150 537.3 455 60.4
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 1.1e-150 537.3 454 57.3
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 5.6e-150 535.0 463 59.2
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.3e-149 533.9 473 59.0
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 3.1e-148 529.3 462 58.9
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 4.0e-148 528.9 454 56.8
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 9.0e-148 527.7 457 58.0
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.9e-147 524.2 478 55.9
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.7e-146 523.5 469 56.5
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 4.9e-146 521.9 456 57.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.4e-146 521.2 457 57.5
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.3e-141 507.3 457 57.1
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 6.2e-141 505.0 460 54.1
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.1e-141 504.6 481 53.8
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 9.0e-140 501.1 467 56.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.1e-137 494.2 470 54.5
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.4e-137 493.8 452 53.1
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.9e-137 493.4 465 53.3
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.9e-137 493.4 470 54.3
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 7.1e-137 491.5 465 53.3
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 9.3e-137 491.1 459 54.9
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 2.7e-136 489.6 452 54.2
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 7.9e-136 488.0 490 52.2
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 8.7e-135 484.6 452 55.8
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 4.3e-134 482.3 452 53.8
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 5.7e-134 481.9 448 55.6
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 1.6e-133 480.3 457 55.4
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.6e-133 480.3 444 55.9
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.8e-133 479.6 467 54.6
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 3.7e-133 479.2 452 53.8
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.2e-133 478.4 448 55.4
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 8.2e-133 478.0 450 52.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 1.8e-132 476.9 464 51.7
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.1e-132 475.7 453 53.4
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.6e-131 473.0 457 51.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 5.8e-131 471.9 454 54.2
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 7.6e-131 471.5 461 53.6
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 7.6e-131 471.5 465 55.1
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.9e-129 466.8 450 51.1
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 5.5e-129 465.3 444 54.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.2e-128 464.2 450 50.7
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.6e-128 463.8 454 55.1
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.1e-128 463.4 467 51.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.7e-128 463.0 454 54.8
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 4.6e-128 462.2 460 52.8
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 4.6e-128 462.2 462 53.9
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 3.0e-127 459.5 458 51.1
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 3.9e-127 459.1 457 51.0
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.9e-126 456.8 442 52.0
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.4e-124 449.9 458 51.1
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.3e-124 448.7 459 52.9
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.4e-123 446.0 457 52.1
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 7.7e-123 444.9 448 51.8
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 2.9e-122 443.0 457 51.4
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.9e-122 443.0 454 52.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.5e-121 439.9 450 51.6
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 3.3e-118 429.5 444 51.6
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.7e-117 427.2 451 49.4
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 9.1e-116 421.4 434 51.2
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 4.2e-113 412.5 455 47.3
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 4.8e-109 399.1 441 49.7
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.4e-108 397.5 441 46.9
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.2e-107 394.4 448 47.3
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 8.5e-106 388.3 468 45.9
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 4.2e-105 386.0 448 48.4
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 5.5e-105 385.6 447 47.7
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.8e-103 380.6 314 62.1
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.5e-102 377.5 408 48.5
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.0e-102 377.1 487 44.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.2e-101 373.6 450 47.1
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.2e-101 373.6 450 47.1
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.1e-100 371.3 444 48.2
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.6e-99 367.5 441 47.8
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.6e-99 367.5 442 46.6
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.5e-99 366.3 435 46.4
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 5.9e-99 365.5 443 46.7
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 7.7e-99 365.2 455 46.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.5e-97 360.1 444 45.5
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 3.0e-95 353.2 444 44.6
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 4.0e-95 352.8 441 45.1
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 8.3e-93 345.1 440 41.6
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.3e-90 337.8 446 42.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 2.1e-88 330.5 451 43.9
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.9e-85 319.3 358 46.6
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 5.0e-82 309.3 320 52.8
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 7.8e-75 285.4 292 51.4
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.7e-69 267.7 233 54.5
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 8.3e-69 265.4 315 48.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.4e-68 263.8 486 34.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.0e-66 258.5 275 52.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 5.8e-62 242.7 324 42.3
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 5.8e-54 216.1 520 32.5
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 5.8e-54 216.1 224 49.1
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.9e-49 201.1 107 87.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 3.3e-49 200.3 380 33.2
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.6e-40 171.4 357 32.2
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.7e-37 161.4 119 67.2
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.2e-36 157.1 190 45.8
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.0e-31 140.2 158 46.8
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 6.4e-29 132.9 433 26.8
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.4e-29 132.5 99 61.6
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.6e-27 128.3 135 46.7
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 4.5e-22 110.2 87 59.8
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 7.1e-20 102.8 234 32.5
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 6.0e-19 99.8 100 46.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.1e-18 96.7 93 50.5
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-17 95.5 64 64.1
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.6e-16 91.7 77 63.6
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.1e-16 91.3 80 62.5
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.9e-12 78.2 163 33.7
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 1.6e-08 65.1 133 35.3


User provided reference genes

Program Settings