Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2743 Fragaria x ananassa HOM05D000312 ORTHO05D000221 4.2e-46 187.6 89 100.0
FvH4_2g27100 Fragaria vesca HOM05D000312 ORTHO05D000221 6.1e-37 157.1 139 61.2
FAN24G1808 Fragaria x ananassa HOM05D000312 ORTHO05D000221 6.1e-37 157.1 139 61.2
RcHm_v2.0_Chr6g0295991 Rosa chinensis HOM05D000312 ORTHO05D000221 7.7e-16 87.0 147 40.8
FvH4_4g18592 Fragaria vesca HOM05D000312 ORTHO05D000221 8.6e-15 83.6 125 48.8
FAN12G1986 Fragaria x ananassa HOM05D000363 ORTHO05D000236 7.2e-14 80.5 138 44.2
FAN12G3474 Fragaria x ananassa HOM05D000363 ORTHO05D000236 1.0e-12 76.6 149 41.6
RcHm_v2.0_Chr6g0296021 Rosa chinensis HOM05D000312 ORTHO05D000221 1.1e-09 66.6 141 34.8
Psat6g010840 Pisum sativum HOM05D000312 ORTHO05D000221 5.4e-09 64.3 149 32.2
RcHm_v2.0_Chr6g0296001 Rosa chinensis HOM05D000312 ORTHO05D000221 9.2e-09 63.5 117 36.8
Actinidia29845 Actinidia chinensis HOM05D000312 ORTHO05D000221 1.6e-08 62.8 89 41.6
arahy.Tifrunner.gnm1.ann1.S3SMBV Arachis hypogaea HOM05D000312 ORTHO05D000221 1.6e-08 62.8 149 30.9
arahy.Tifrunner.gnm1.ann1.X6923X Arachis hypogaea HOM05D000312 ORTHO05D000221 1.6e-08 62.8 149 30.9
Prupe.1G384700 Prunus persica HOM05D000312 ORTHO05D000221 5.9e-08 60.8 148 31.8
Oeu009594.1 Olea europaea HOM05D000312 ORTHO05D000221 7.8e-08 60.5 148 30.4
Eucgr.A00481 Eucalyptus grandis HOM05D000312 ORTHO05D000221 1.0e-07 60.1 147 32.0
Glyma.17G247500 Glycine max HOM05D000312 ORTHO05D000221 1.0e-07 60.1 149 30.2
SGA_v2.0_scaffold24G10274 Striga asiatica HOM05D000312 ORTHO05D000221 1.0e-07 60.1 149 31.5
MD00G1039500 Malus domestica HOM05D000312 ORTHO05D000221 3.9e-07 58.2 147 30.6
Medtr1g021825 Medicago truncatula HOM05D000312 ORTHO05D000221 3.9e-07 58.2 149 30.2
QL02p007238 Quercus lobata HOM05D000312 ORTHO05D000221 3.9e-07 58.2 144 31.2
Phvul.001G017300 Phaseolus vulgaris HOM05D000312 ORTHO05D000221 8.6e-07 57.0 149 28.9
RcHm_v2.0_Chr6g0248741 Rosa chinensis HOM05D000312 ORTHO05D000221 8.6e-07 57.0 82 41.5
MSTRG.25133 Avicennia marina HOM05D000312 ORTHO05D000221 1.5e-06 56.2 149 30.9
Lj5g0020125 Lotus japonicus HOM05D000312 ORTHO05D000221 1.5e-06 56.2 146 29.5
MD08G1037400 Malus domestica HOM05D000312 ORTHO05D000221 1.9e-06 55.8 147 29.9
Nitab4.5_0000110g0120 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.5e-06 55.5 87 39.1
Migut.C00673 Erythranthe guttata HOM05D000312 ORTHO05D000221 3.3e-06 55.1 148 30.4
RcHm_v2.0_Chr6g0252101 Rosa chinensis HOM05D000312 ORTHO05D000221 3.3e-06 55.1 118 33.9
Sopen04g033380 Solanum pennellii HOM05D000312 ORTHO05D000221 3.3e-06 55.1 87 40.2
PGSC0003DMG400016882 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.3e-06 55.1 87 40.2
VMungo0647G1595 Vigna mungo HOM05D000312 ORTHO05D000221 3.3e-06 55.1 147 27.9
Atru.chr13.564 Acer truncatum HOM05D000312 ORTHO05D000221 4.3e-06 54.7 67 43.3
CAN.G371.120 Capsicum annuum HOM05D000312 ORTHO05D000221 4.3e-06 54.7 87 40.2
RcHm_v2.0_Chr6g0248651 Rosa chinensis HOM05D000312 ORTHO05D000221 4.3e-06 54.7 82 40.2
Actinidia38025 Actinidia chinensis HOM05D000312 ORTHO05D000221 5.6e-06 54.3 149 29.5
Cc10_g03500 Coffea canephora HOM05D000312 ORTHO05D000221 5.6e-06 54.3 149 29.5
Ca_13329_v3 Cicer arietinum L. HOM05D000312 ORTHO05D000221 7.3e-06 53.9 149 28.9
MD05G1157700 Malus domestica HOM05D000312 ORTHO05D000221 7.3e-06 53.9 149 28.2
Lj4A46T100 Lonicera japonica HOM05D000312 ORTHO05D000221 9.5e-06 53.5 140 31.4
Rhsim07G0234700 Rhododendron simsii HOM05D000312 ORTHO05D000221 9.5e-06 53.5 149 29.5
vmacro04489 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 9.5e-06 53.5 149 29.5


User provided reference genes

Program Settings