Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 8.8e-163 577.0 317 100.0
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.3e-158 563.1 317 97.8
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 4.2e-157 558.1 316 97.2
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.6e-151 539.7 317 93.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 3.5e-127 458.8 319 79.6
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 5.0e-118 428.3 307 77.9
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.5e-114 416.8 307 74.3
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 2.9e-113 412.5 304 74.0
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 2.4e-112 409.5 306 72.9
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 3.2e-112 409.1 305 73.4
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 1.6e-111 406.8 306 75.5
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 1.1e-109 400.6 306 71.2
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 2.8e-108 396.0 303 71.9
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 6.2e-108 394.8 308 70.5
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.1e-107 394.0 304 72.7
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 4.0e-107 392.1 308 70.1
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 4.4e-106 388.7 308 68.8
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 2.4e-104 382.9 307 69.1
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 1.3e-102 377.1 308 69.2
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 3.9e-102 375.6 294 70.4
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 1.9e-101 373.2 307 67.4
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.5e-101 372.9 294 69.0
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.3e-101 372.1 296 68.9
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 6.2e-100 368.2 286 72.0
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 8.1e-100 367.9 304 69.1
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 5.2e-99 365.2 304 67.4
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 8.9e-99 364.4 304 65.5
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 8.9e-99 364.4 306 64.1
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.5e-98 363.6 306 64.7
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 2.6e-98 362.8 303 64.7
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.9e-97 359.4 303 66.3
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 7.8e-95 351.3 282 70.2
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.5e-93 347.1 300 63.0
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 4.3e-93 345.5 298 64.8
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 5.6e-93 345.1 307 64.2
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.6e-92 343.6 274 68.6
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.5e-90 337.0 272 68.8
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.6e-90 336.3 295 64.1
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 9.9e-90 334.3 300 63.7
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 6.4e-89 331.6 307 61.9
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 8.4e-89 331.3 302 63.2
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 2.4e-88 329.7 293 63.1
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 3.2e-88 329.3 295 63.7
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 9.3e-88 327.8 217 78.3
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.7e-87 326.2 299 61.9
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 1.9e-85 320.1 295 60.7
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 6.4e-81 305.1 298 62.8
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.5e-77 293.9 292 58.6
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 4.3e-77 292.4 306 56.2
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 5.3e-75 285.4 307 52.8
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 4.5e-74 282.3 292 58.2
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 1.3e-73 280.8 305 56.1
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 4.6e-71 272.3 241 64.7
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.3e-68 264.2 247 63.6
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 5.3e-59 232.3 234 62.0
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 1.4e-54 217.6 207 59.9
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 7.4e-53 211.8 192 59.4
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 7.0e-35 152.1 274 39.1
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 3.5e-26 123.2 267 36.7
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 2.8e-20 103.6 289 31.8
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 4.1e-19 99.8 72 69.4
EL10Ac2g04870 Beta vulgaris HOM05D000215 ORTHO05D008904 4.6e-10 69.7 285 25.3
AUR62012277 Chenopodium quinoa HOM05D000215 ORTHO05D008904 1.7e-09 67.8 271 26.9
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 2.5e-08 63.9 272 25.0
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 2.5e-08 63.9 239 29.7
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 4.3e-08 63.2 248 31.9
Lsat_1_v5_gn_9_17860 Lactuca sativa HOM05D000215 ORTHO05D002282 9.5e-08 62.0 281 24.2
FvH4_1g29130 Fragaria vesca HOM05D001865 ORTHO05D001815 1.2e-07 61.6 284 22.2
FAN19G0114 Fragaria x ananassa HOM05D001865 ORTHO05D001815 2.1e-07 60.8 284 22.2
MBI02_g37288_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D007108 2.1e-07 60.8 218 29.4
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 3.6e-07 60.1 274 28.8
FAN28G1515 Fragaria x ananassa HOM05D001865 ORTHO05D001815 4.7e-07 59.7 284 21.8
MSTRG.20988 Avicennia marina HOM05D000215 ORTHO05D002282 6.2e-07 59.3 270 23.0
PGR119G1537 Punica granatum HOM05D000577 ORTHO05D003389 6.2e-07 59.3 262 25.6
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 8.0e-07 58.9 267 26.2
Phvul.008G134400 Phaseolus vulgaris HOM05D000215 ORTHO05D002282 8.0e-07 58.9 284 22.2
Thecc.06G205300 Theobroma cacao HOM05D000215 ORTHO05D007108 8.0e-07 58.9 210 31.0
HPP92_018555 Vanilla planifolia HOM05D002086 ORTHO05D004968 8.0e-07 58.9 287 25.8
FAN23G2654 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.1e-06 58.5 284 21.8
MD07G1049200 Malus domestica HOM05D006338 ORTHO05D007946 1.1e-06 58.5 294 26.2
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 1.1e-06 58.5 200 29.0
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.4e-06 58.2 201 30.3
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.4e-06 58.2 201 30.3
FAN26G2438 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.8e-06 57.8 284 21.5
SHI10321 Sapria himalayana HOM05D000215 ORTHO05D002282 1.8e-06 57.8 296 26.0
HanXRQChr07g0193091 Helianthus annuus HOM05D000215 ORTHO05D002282 2.3e-06 57.4 281 22.4
HanXRQChr08g0231761 Helianthus annuus HOM05D000215 ORTHO05D002282 2.3e-06 57.4 281 23.8
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 2.3e-06 57.4 293 25.6
Manes.17G031300 Manihot esculenta HOM05D000215 ORTHO05D007108 2.3e-06 57.4 217 29.0
CDE04G1811 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 3.1e-06 57.0 292 24.7
Ca_23967_v3 Cicer arietinum L. HOM05D006338 ORTHO05D007946 3.1e-06 57.0 299 26.8
COL.COLO4_31663 Corchorus olitorius HOM05D000215 ORTHO05D007108 3.1e-06 57.0 206 30.6
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 3.1e-06 57.0 201 29.9
Nn7g36735 Nelumbo nucifera HOM05D006338 ORTHO05D007946 3.1e-06 57.0 285 26.7
Actinidia13517 Actinidia chinensis HOM05D000215 ORTHO05D003454 4.0e-06 56.6 277 25.6
THA.LOC104806263 Tarenaya hassleriana HOM05D000215 ORTHO05D007108 4.0e-06 56.6 282 27.7
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 5.2e-06 56.2 199 31.2
Glyma.18G155200 Glycine max HOM05D000215 ORTHO05D002282 5.2e-06 56.2 284 21.8
CSS0025946 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 6.8e-06 55.8 272 25.4
CSS0030448 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 6.8e-06 55.8 272 25.4
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 6.8e-06 55.8 218 30.7
Ciclev10030876m.g Citrus clementina HOM05D000215 ORTHO05D003454 6.8e-06 55.8 270 26.3
DCAR_026544 Daucus carota HOM05D000215 ORTHO05D003454 6.8e-06 55.8 283 26.9
Nn1g06886 Nelumbo nucifera HOM05D000215 ORTHO05D007108 6.8e-06 55.8 200 32.0
PSO832G3300 Papaver somniferum HOM05D000215 ORTHO05D007108 6.8e-06 55.8 201 31.8
MD09G1261900 Malus domestica HOM05D001865 ORTHO05D001815 8.9e-06 55.5 285 21.4


User provided reference genes

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