Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.5e-200 700.7 329 100.0
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.9e-195 683.7 323 99.1
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.5e-194 682.6 323 98.8
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 5.0e-193 677.6 323 98.1
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.7e-189 664.1 346 91.6
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 8.2e-188 660.2 323 94.7
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 6.1e-183 644.0 323 91.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 8.8e-182 640.2 323 90.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.6e-175 618.2 327 85.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.0e-174 616.7 323 86.1
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.0e-174 615.1 323 87.6
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 5.2e-174 614.4 327 85.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 6.7e-174 614.0 327 85.6
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 8.8e-174 613.6 327 86.2
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.5e-173 612.8 327 85.6
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.6e-173 612.1 327 85.6
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 2.6e-173 612.1 327 84.7
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.6e-173 612.1 327 84.7
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 2.6e-173 612.1 327 83.5
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 5.7e-173 610.9 335 83.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 5.7e-173 610.9 327 85.0
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 9.7e-173 610.1 327 84.1
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 9.7e-173 610.1 327 85.0
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.3e-172 609.8 327 84.4
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.7e-172 609.4 327 85.3
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 2.2e-172 609.0 327 84.1
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 4.8e-172 607.8 327 83.8
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 4.8e-172 607.8 327 84.1
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 6.3e-172 607.4 327 84.7
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.8e-171 605.9 324 84.9
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 2.4e-171 605.5 323 85.1
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 2.4e-171 605.5 323 85.1
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.4e-171 605.5 323 85.4
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 4.1e-171 604.7 327 82.9
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 5.3e-171 604.4 324 84.3
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 9.1e-171 603.6 327 83.5
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 9.1e-171 603.6 323 84.8
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.2e-170 603.2 323 84.5
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.2e-170 603.2 323 84.2
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.2e-170 603.2 329 84.2
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.0e-170 602.4 323 83.9
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.0e-170 602.4 349 80.8
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.6e-170 602.1 329 84.5
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 2.6e-170 602.1 323 84.5
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.5e-170 601.7 328 83.2
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 5.9e-170 600.9 327 82.6
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 5.9e-170 600.9 323 84.5
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.0e-169 600.1 325 83.1
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.0e-169 600.1 327 83.5
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.7e-169 599.4 312 86.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.7e-169 599.4 312 86.5
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.7e-169 599.4 324 84.0
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 2.2e-169 599.0 327 84.1
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.9e-169 598.6 324 83.6
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.8e-169 598.2 324 84.0
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 3.8e-169 598.2 323 83.9
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 5.0e-169 597.8 312 86.2
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 5.0e-169 597.8 312 86.2
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 6.5e-169 597.4 324 83.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.2e-168 595.1 325 83.4
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 9.4e-168 593.6 325 83.7
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.2e-167 593.2 313 85.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.6e-167 592.8 327 82.3
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 3.6e-167 591.7 323 82.7
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 8.0e-167 590.5 318 83.6
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.0e-166 590.1 323 82.4
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 3.0e-166 588.6 315 85.1
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.0e-166 588.2 323 82.0
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.5e-165 586.3 315 84.1
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.0e-165 585.9 327 82.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 7.5e-165 583.9 341 79.2
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 2.2e-164 582.4 318 81.4
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 4.8e-164 581.3 351 76.6
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.8e-163 579.3 331 81.0
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 4.1e-163 578.2 323 81.4
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.5e-162 575.1 318 80.8
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.3e-161 573.2 331 79.8
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.2e-161 572.4 331 81.0
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 3.8e-161 571.6 318 80.5
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 8.0e-159 563.9 319 79.9
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 3.0e-158 562.0 344 75.9
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.8e-156 554.7 324 77.5
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 8.3e-156 553.9 335 76.7
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.0e-154 549.3 297 82.5
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 7.7e-154 547.4 357 74.5
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.0e-153 547.0 331 78.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.7e-151 538.1 293 81.9
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 5.2e-150 534.6 327 75.2
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 6.8e-150 534.3 327 75.5
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.3e-144 515.0 324 74.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.6e-143 513.1 287 78.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.6e-141 505.8 311 71.7
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.7e-140 503.1 321 68.5
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.7e-140 503.1 310 71.6
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 4.9e-140 501.5 307 71.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 4.0e-134 481.9 575 48.2
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.3e-128 462.2 313 66.8
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.6e-122 443.4 246 80.1
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.6e-106 390.2 270 69.6
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.6e-103 379.0 282 64.9
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 5.3e-102 375.2 200 84.0
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 5.4e-99 365.2 220 78.2
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.9e-91 340.1 349 45.6
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.0e-84 317.8 347 44.4
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 4.6e-82 308.9 310 46.5
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.1e-81 305.4 311 46.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.1e-72 277.7 163 77.3
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.4e-57 227.6 167 65.3
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.0e-57 226.5 343 38.8
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.4e-56 222.6 122 78.7
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.1e-54 216.5 192 55.7
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-50 204.5 204 54.4
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 6.1e-50 202.2 153 67.3
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.3e-47 194.5 196 46.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 3.1e-30 136.7 79 74.7
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.9e-22 110.9 65 76.9
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.2e-16 91.7 79 51.9
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 2.3e-12 77.4 62 61.3
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.5e-11 74.7 38 78.9
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 6.8e-09 65.9 116 33.6
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.5e-08 64.7 34 79.4
Cfa005891 Carpinus fangiana HOM05D000363 ORTHO05D000236 1.3e-07 61.6 125 29.6
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 1.3e-07 61.6 126 29.4
QL12p028134 Quercus lobata HOM05D000363 ORTHO05D000236 1.4e-06 58.2 109 29.4
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 2.4e-06 57.4 145 28.3
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 2.4e-06 57.4 100 32.0
PSO339G5342 Papaver somniferum HOM05D000363 ORTHO05D000236 5.4e-06 56.2 126 30.2
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 7.1e-06 55.8 120 31.7


User provided reference genes

Program Settings