Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.8e-66 255.8 129 100.0
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 1.7e-64 249.2 129 96.9
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 2.7e-62 241.9 129 93.8
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.3e-61 238.8 119 99.2
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 5.7e-60 234.2 129 91.5
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 9.7e-60 233.4 129 91.5
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 1.4e-58 229.6 129 88.4
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 2.4e-58 228.8 129 88.4
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 4.1e-58 228.0 128 86.7
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 9.1e-58 226.9 129 87.6
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 4.5e-57 224.6 127 89.8
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 5.0e-56 221.1 129 85.3
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 5.0e-56 221.1 128 84.4
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 6.5e-56 220.7 129 84.5
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 6.5e-56 220.7 129 83.7
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 6.5e-56 220.7 129 86.0
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.1e-55 219.9 129 84.5
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 1.1e-55 219.9 129 84.5
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 1.1e-55 219.9 129 84.5
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 1.4e-55 219.5 128 85.2
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 1.4e-55 219.5 129 84.5
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 1.9e-55 219.2 129 84.5
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 1.9e-55 219.2 129 85.3
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 3.2e-55 218.4 129 82.9
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 4.2e-55 218.0 129 83.7
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 4.2e-55 218.0 127 85.8
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 5.5e-55 217.6 129 82.9
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 7.2e-55 217.2 129 85.3
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 9.4e-55 216.9 129 82.2
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 9.4e-55 216.9 129 82.2
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 9.4e-55 216.9 129 82.9
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 9.4e-55 216.9 129 83.7
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 1.2e-54 216.5 129 83.7
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 1.2e-54 216.5 129 83.7
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 1.6e-54 216.1 129 80.6
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 2.7e-54 215.3 129 82.2
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 3.6e-54 214.9 129 82.2
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 3.6e-54 214.9 129 82.9
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 7.9e-54 213.8 127 82.7
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 1.0e-53 213.4 127 81.9
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.0e-53 213.4 122 86.9
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 1.0e-53 213.4 129 81.4
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 1.8e-53 212.6 129 83.7
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 1.8e-53 212.6 129 82.9
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.3e-53 212.2 130 85.4
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 2.3e-53 212.2 129 82.2
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 3.9e-53 211.5 124 83.9
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 1.1e-52 209.9 129 81.4
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 1.1e-52 209.9 129 79.1
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 1.5e-52 209.5 129 80.6
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 2.0e-52 209.1 127 80.3
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 2.0e-52 209.1 129 79.8
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 2.0e-52 209.1 129 80.6
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.3e-52 208.4 121 87.6
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 3.3e-52 208.4 129 80.6
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 3.3e-52 208.4 129 82.2
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 3.3e-52 208.4 127 78.7
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 4.4e-52 208.0 129 79.8
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 4.4e-52 208.0 129 79.8
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 5.7e-52 207.6 123 78.9
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 5.7e-52 207.6 129 80.6
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 7.4e-52 207.2 129 78.3
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 9.7e-52 206.8 129 79.1
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 1.3e-51 206.5 127 80.3
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 1.3e-51 206.5 119 85.7
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 1.3e-51 206.5 129 79.8
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 1.3e-51 206.5 119 84.9
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 1.7e-51 206.1 119 84.0
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 2.2e-51 205.7 129 78.3
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 2.8e-51 205.3 127 78.0
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 2.8e-51 205.3 121 81.8
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 2.8e-51 205.3 119 82.4
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 3.7e-51 204.9 119 83.2
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 78.3
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 78.3
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 78.3
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 4.8e-51 204.5 127 78.7
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 6.3e-51 204.1 127 78.7
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 8.2e-51 203.8 119 83.2
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 8.2e-51 203.8 120 83.3
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 1.4e-50 203.0 127 78.7
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 3.1e-50 201.8 130 78.5
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 4.1e-50 201.4 119 82.4
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 4.1e-50 201.4 127 78.0
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 4.1e-50 201.4 129 79.1
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 4.1e-50 201.4 119 83.2
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 5.3e-50 201.1 119 83.2
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 7.0e-50 200.7 119 81.5
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 9.1e-50 200.3 127 78.0
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 1.2e-49 199.9 119 82.4
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 1.6e-49 199.5 119 81.5
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 2.0e-49 199.1 127 77.2
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 2.6e-49 198.7 119 80.7
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 3.5e-49 198.4 129 74.4
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 4.5e-49 198.0 119 78.2
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 5.9e-49 197.6 119 80.7
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 2.2e-48 195.7 119 82.4
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 2.2e-48 195.7 122 76.2
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 1.1e-47 193.4 129 72.9
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 2.5e-47 192.2 122 78.7
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 9.4e-47 190.3 119 76.5
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 9.4e-47 190.3 121 76.9
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 9.4e-47 190.3 121 76.9
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 1.6e-46 189.5 128 70.3
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 2.1e-46 189.1 129 74.4
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 4.7e-46 188.0 119 76.5
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 8.0e-46 187.2 119 76.5
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.0e-45 186.8 146 65.1
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 1.5e-44 183.0 119 73.1
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 2.0e-44 182.6 119 72.3
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.0e-44 182.6 117 74.4
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 2.6e-44 182.2 128 72.7
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 3.3e-44 181.8 148 65.5
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 5.7e-44 181.0 119 73.9
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 1.2e-41 173.3 107 77.6
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 2.7e-41 172.2 105 79.0
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 5.9e-41 171.0 107 79.4
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 7.7e-41 170.6 129 68.2
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 1.0e-40 170.2 119 68.9
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 1.4e-37 159.8 133 66.2
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.4e-37 159.8 96 80.2
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 4.0e-37 158.3 109 73.4
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.2e-36 156.8 95 78.9
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.0e-36 156.0 96 78.1
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 5.4e-34 147.9 97 74.2
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 7.0e-34 147.5 129 58.9
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 3.5e-33 145.2 113 60.2
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 1.0e-32 143.7 143 52.4
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 1.9e-31 139.4 100 70.0
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 3.0e-29 132.1 141 49.6
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 6.8e-29 131.0 98 70.4
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 4.4e-28 128.3 113 56.6
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.7e-27 126.3 92 70.7
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 1.4e-26 123.2 99 58.6
arahy.Tifrunner.gnm1.ann1.3DP3ZG Arachis hypogaea HOM05D005344 ORTHO05D006444 2.3e-13 79.3 51 74.5
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.2e-09 67.0 39 74.4
CSS0035037 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 8.6e-08 60.8 39 74.4
CBR_g48744 Chara braunii HOM05D005344 ORTHO05D006444 8.1e-06 54.3 66 37.9


User provided reference genes

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