Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 0.0e+00 1241.1 808 100.0
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 0.0e+00 1203.3 813 95.6
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 0.0e+00 1198.7 815 95.2
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.3e-303 1046.2 817 84.5
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.9e-233 813.1 845 67.7
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.5e-203 713.8 895 61.8
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 1.4e-193 680.6 853 64.4
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.5e-190 670.6 523 94.1
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 2.0e-179 633.6 919 51.3
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 3.4e-179 632.9 914 50.1
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 2.4e-172 610.1 874 49.3
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 4.1e-172 609.4 829 55.6
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 1.1e-164 584.7 870 51.8
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 4.1e-164 582.8 851 53.0
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 1.0e-162 578.2 834 55.2
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.7e-162 577.4 858 51.5
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 2.2e-162 577.0 1000 49.4
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 3.5e-155 553.1 827 52.5
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.1e-153 548.1 846 49.3
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 4.2e-153 546.2 836 52.5
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.8e-151 540.8 841 49.6
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.9e-145 520.8 841 47.3
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.0e-143 515.0 861 48.0
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.0e-143 515.0 859 46.7
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.3e-143 513.8 861 49.1
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 5.2e-143 512.7 827 49.5
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 6.8e-143 512.3 889 44.4
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 1.1e-140 505.0 801 50.8
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.7e-139 500.4 843 48.9
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.2e-133 480.7 803 50.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.1e-129 468.4 821 49.2
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.5e-129 468.0 876 43.0
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.5e-129 467.2 847 48.9
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 3.3e-129 466.8 825 45.9
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 4.3e-129 466.5 802 51.5
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 8.0e-128 462.2 815 51.3
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 2.0e-126 457.6 887 47.5
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 9.8e-126 455.3 798 46.9
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 6.4e-125 452.6 445 62.0
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 5.4e-124 449.5 894 47.2
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 2.0e-123 447.6 681 44.6
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 2.7e-123 447.2 792 46.6
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.0e-122 445.3 828 44.8
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.0e-122 445.3 830 48.4
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 1.3e-122 444.9 938 39.3
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 3.0e-122 443.7 453 58.9
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 1.9e-121 441.0 875 43.5
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.8e-119 434.5 857 47.5
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 8.9e-119 432.2 832 46.6
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 1.5e-118 431.4 471 56.3
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 9.8e-118 428.7 814 40.5
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 6.4e-117 426.0 861 47.5
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 3.2e-116 423.7 825 43.9
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 2.1e-115 421.0 809 45.9
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 2.3e-114 417.5 965 39.4
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 1.6e-112 411.4 855 43.9
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 8.1e-112 409.1 838 40.7
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 4.0e-111 406.8 873 44.8
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 8.9e-111 405.6 434 59.0
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 1.2e-110 405.2 860 41.6
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.2e-110 405.2 913 43.9
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 4.4e-110 403.3 707 44.6
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 5.8e-110 402.9 683 42.9
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 2.9e-109 400.6 803 45.6
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 3.2e-108 397.1 820 41.8
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 4.1e-108 396.7 802 42.8
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 7.1e-108 396.0 821 43.8
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 1.2e-107 395.2 804 42.9
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 2.7e-107 394.0 778 42.0
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 6.0e-107 392.9 659 47.2
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 2.5e-105 387.5 808 44.1
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 9.6e-105 385.6 758 41.2
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 2.1e-104 384.4 824 42.4
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 2.1e-104 384.4 802 43.0
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 1.1e-103 382.1 804 37.6
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 2.6e-102 377.5 804 43.3
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 2.6e-102 377.5 763 40.6
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 2.2e-101 374.4 451 51.9
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 2.9e-101 374.0 726 47.2
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 3.8e-101 373.6 804 41.4
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 1.4e-100 371.7 792 43.7
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 4.6e-99 366.7 816 39.2
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 4.3e-97 360.1 502 47.2
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 3.6e-96 357.1 892 44.2
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 3.1e-95 354.0 403 54.8
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.2e-94 352.1 777 47.0
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 2.4e-92 344.4 903 35.9
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 9.3e-92 342.4 808 42.3
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.0e-90 339.0 892 35.5
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.3e-88 332.0 459 48.1
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 9.0e-87 325.9 398 51.0
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 1.1e-84 318.9 474 48.3
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 9.3e-84 315.8 464 46.3
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 2.1e-83 314.7 825 36.7
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 3.4e-78 297.4 436 47.2
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 7.6e-78 296.2 436 46.1
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 7.4e-49 199.9 631 32.2
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 7.4e-49 199.9 631 32.2
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 5.0e-45 187.2 149 69.8
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 5.0e-45 187.2 169 65.7
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 5.0e-45 187.2 638 35.4
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.9e-44 185.3 342 41.5
RcHm_v2.0_Chr4g0423461 Rosa chinensis HOM05D006481 ORTHO05D000001 4.0e-42 177.6 119 78.2
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.2e-33 149.4 372 36.8
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.2e-33 149.4 903 26.1
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 3.1e-31 141.4 416 33.7
RcHm_v2.0_Chr4g0421911 Rosa chinensis HOM05D006481 ORTHO05D008160 5.9e-30 137.1 270 46.7
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 5.9e-30 137.1 132 62.1
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 9.5e-28 129.8 163 50.9
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 2.3e-26 125.2 66 95.5
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 6.3e-24 117.1 244 39.3
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 3.5e-22 111.3 213 38.0
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 7.3e-20 103.6 416 32.2
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 5.2e-18 97.4 140 47.9
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 1.2e-17 96.3 64 73.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 2.6e-09 68.6 106 41.5
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 5.8e-09 67.4 274 40.1
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 9.8e-09 66.6 61 54.1
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 2.0e-06 58.9 56 53.6
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 3.5e-06 58.2 35 77.1


User provided reference genes

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