Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 5.4e-256 887.1 430 100.0
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.6e-252 875.5 430 98.4
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 5.8e-250 867.1 430 97.2
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.4e-235 819.3 431 91.9
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.6e-183 646.4 441 72.6
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 3.5e-178 628.6 443 70.4
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.1e-176 623.6 439 67.7
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 6.1e-175 617.8 443 66.6
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.3e-174 615.9 447 67.6
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 3.9e-174 615.1 449 66.6
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.0e-173 612.8 440 68.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.0e-173 612.8 430 69.5
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.7e-172 609.8 428 67.3
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.7e-172 608.6 437 66.4
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 4.1e-171 605.1 440 68.0
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 6.1e-167 591.3 434 66.8
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 6.7e-166 587.8 431 67.3
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 8.8e-166 587.4 431 65.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.5e-165 586.6 434 66.1
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.6e-165 585.9 439 64.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.4e-165 585.1 438 66.0
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.7e-164 583.2 442 64.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.7e-164 582.0 440 65.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 8.3e-164 580.9 430 65.6
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.2e-162 577.0 412 66.5
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.6e-162 576.6 435 63.9
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.6e-162 576.6 436 63.3
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.5e-162 575.5 436 65.6
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.3e-161 573.5 349 75.6
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.9e-160 569.7 429 63.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 4.2e-160 568.5 431 64.5
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 5.5e-160 568.2 429 62.7
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 5.5e-160 568.2 429 63.9
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 8.0e-159 564.3 425 63.1
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.0e-159 564.3 426 62.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.4e-158 563.5 449 61.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 2.3e-158 562.8 429 62.0
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 5.2e-158 561.6 421 64.4
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 6.8e-158 561.2 429 63.4
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 8.8e-158 560.8 431 63.1
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.2e-157 560.5 431 63.3
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.6e-157 559.3 428 62.1
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.4e-157 558.9 427 62.8
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 7.5e-157 557.8 415 64.1
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.7e-156 556.6 418 64.1
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.8e-156 555.8 439 62.4
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.8e-156 555.8 438 61.2
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.8e-156 555.1 431 61.5
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.4e-155 553.5 434 61.8
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.1e-155 552.4 441 60.5
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 7.0e-155 551.2 424 64.4
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.0e-154 549.7 425 63.3
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.5e-154 548.5 432 62.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 4.5e-154 548.5 426 63.4
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 5.9e-154 548.1 432 62.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 5.9e-154 548.1 446 61.7
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.9e-154 548.1 440 60.2
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.3e-153 546.2 425 62.8
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.3e-153 546.2 431 62.2
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-153 546.2 452 61.3
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.6e-153 544.7 431 61.9
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.1e-152 543.9 402 63.9
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 5.5e-152 541.6 437 60.2
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 9.5e-152 540.8 424 61.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.2e-151 540.4 417 63.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 3.0e-150 535.8 420 61.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.0e-150 535.4 430 61.2
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.9e-150 534.3 425 62.1
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 8.9e-150 534.3 438 58.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 3.4e-149 532.3 431 61.3
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.7e-149 531.6 432 60.6
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 9.8e-149 530.8 420 60.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 2.2e-148 529.6 419 60.4
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.8e-148 529.3 432 59.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.8e-148 529.3 428 60.0
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.8e-148 529.3 428 60.0
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.8e-148 529.3 428 60.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.9e-148 528.5 431 58.9
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.9e-148 528.5 414 61.6
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 6.3e-148 528.1 415 61.0
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 6.3e-148 528.1 419 60.4
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 8.3e-148 527.7 428 60.3
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 8.3e-148 527.7 436 59.9
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.4e-147 526.2 421 60.3
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.4e-147 526.2 421 60.3
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.4e-147 526.2 421 60.3
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.4e-147 525.0 430 59.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 5.4e-147 525.0 424 60.1
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 7.0e-147 524.6 388 66.5
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.6e-146 523.5 423 59.6
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.7e-146 522.7 346 68.8
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.7e-146 522.7 405 63.5
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.5e-146 522.3 345 69.3
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 3.5e-146 522.3 428 59.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 3.5e-146 522.3 414 60.4
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.3e-145 519.6 426 58.9
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 2.3e-145 519.6 415 61.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.9e-145 519.2 455 57.1
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.9e-145 518.8 441 57.6
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 5.0e-145 518.5 428 58.9
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 5.0e-145 518.5 427 59.0
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 8.6e-145 517.7 424 59.7
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.5e-144 516.9 409 62.1
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.5e-144 516.9 427 59.5
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.5e-144 516.9 448 59.4
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.3e-144 515.8 433 57.3
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 7.3e-144 514.6 429 58.0
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.1e-143 513.1 408 61.3
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 2.8e-143 512.7 431 58.9
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 3.6e-143 512.3 414 61.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.4e-141 505.8 424 58.3
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-141 505.8 344 66.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 8.3e-140 501.1 437 60.0
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 6.0e-138 495.0 407 58.5
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-135 486.9 414 60.1
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 6.2e-135 485.0 413 57.9
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 6.8e-134 481.5 442 55.4
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-132 476.1 422 58.5
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 8.3e-132 474.6 427 57.6
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.9e-131 473.4 327 69.4
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.2e-131 472.6 413 57.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-131 472.6 418 57.7
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.1e-131 472.2 416 54.1
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 5.4e-131 471.9 332 63.6
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 7.0e-131 471.5 421 58.7
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-130 470.7 429 57.3
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 6.6e-129 464.9 411 57.9
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 8.6e-129 464.5 415 58.6
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-128 464.2 444 54.1
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-128 462.2 418 57.4
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 9.5e-128 461.1 349 59.6
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.8e-127 459.5 428 56.5
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 3.4e-125 452.6 344 60.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.4e-125 452.6 376 56.6
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.7e-124 449.1 460 52.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 3.5e-122 442.6 289 68.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.0e-121 439.5 250 80.8
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.7e-119 432.2 341 59.2
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.0e-117 426.8 341 58.7
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.9e-113 412.5 368 54.6
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.8e-109 398.7 411 50.1
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 4.2e-107 392.5 438 49.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 4.2e-107 392.5 370 52.7
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.5e-104 383.3 307 58.0
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.3e-102 375.6 252 66.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-101 374.0 346 52.0
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-101 373.6 372 48.9
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.5e-101 372.5 403 48.1
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-100 370.9 240 70.0
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.9e-100 369.8 343 50.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.1e-94 351.3 289 63.3
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-93 347.8 343 49.3
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.3e-92 344.4 338 49.1
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-90 337.4 240 62.1
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.6e-90 337.4 341 46.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-89 334.3 349 48.7
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.8e-89 334.0 346 47.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 5.8e-85 318.9 387 45.2
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 7.1e-83 312.0 237 58.6
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 8.7e-81 305.1 237 55.7
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.3e-80 302.8 345 45.2
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.3e-79 298.9 346 43.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.9e-73 279.6 340 40.9
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-72 278.1 344 39.5
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 9.7e-72 275.0 306 44.4
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.8e-70 270.8 341 39.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.1e-70 270.0 344 40.4
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 3.1e-70 270.0 240 50.0
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.5e-67 260.4 343 39.1
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 6.1e-58 229.2 360 37.5
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.2e-43 179.9 149 61.7
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.6e-32 144.1 426 26.3
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.2e-31 141.0 154 46.8
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.5e-27 127.5 124 57.3
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 6.4e-23 112.8 85 54.1
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.7e-20 104.8 120 40.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.6e-20 102.8 100 44.0
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 3.6e-18 97.1 79 46.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.1e-13 81.3 86 39.5
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.6e-11 73.2 87 42.5
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 9.5e-11 72.4 67 43.3
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 6.8e-09 66.2 47 70.2
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.4e-07 59.3 36 72.2


User provided reference genes

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