Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 8.6e-198 693.7 425 100.0
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.1e-160 570.5 448 81.9
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.5e-154 550.1 453 79.9
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.2e-132 476.5 414 80.4
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 5.4e-67 259.2 239 62.3
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 2.5e-56 223.8 460 36.5
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.1e-46 191.8 440 36.4
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 2.4e-38 164.1 259 40.5
FAN21G1377 Fragaria x ananassa HOM05D049070 ORTHO05D007526 4.1e-38 163.3 154 75.3
FAN21G3562 Fragaria x ananassa HOM05D049070 ORTHO05D007526 4.1e-38 163.3 154 75.3
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.2e-37 161.8 278 40.3
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.0e-36 158.7 277 39.4
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.0e-36 158.7 254 40.2
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.7e-36 157.9 270 38.9
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.8e-36 156.8 256 41.0
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 6.5e-36 156.0 266 38.3
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 1.6e-34 151.4 269 37.2
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 1.6e-34 151.4 253 41.5
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 3.6e-34 150.2 264 38.6
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 3.6e-34 150.2 267 38.6
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 2.0e-32 144.4 241 41.5
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 2.0e-32 144.4 266 38.3
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 7.4e-32 142.5 250 37.6
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 6.3e-31 139.4 266 36.1
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 2.6e-29 134.0 252 37.7
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 4.5e-29 133.3 210 41.0
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.7e-28 131.3 262 36.6
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.7e-28 131.3 262 37.0
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 1.7e-28 131.3 262 37.0
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 2.9e-28 130.6 245 35.5
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 5.0e-28 129.8 254 35.8
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.2e-26 125.2 253 34.4
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 1.0e-25 122.1 257 37.7
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 2.3e-25 120.9 208 38.0
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 3.0e-25 120.6 267 34.1
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 5.1e-25 119.8 191 37.7
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 6.7e-25 119.4 262 34.7
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 1.1e-24 118.6 259 34.0
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 3.3e-24 117.1 208 37.5
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 4.4e-24 116.7 253 32.8
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 7.4e-24 115.9 246 35.4
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 1.7e-23 114.8 254 33.9
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.7e-23 113.6 249 35.7
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 8.2e-23 112.5 259 33.6
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 3.1e-22 110.5 263 33.1
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 1.2e-21 108.6 196 38.3
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.5e-21 108.2 253 34.0
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 5.9e-21 106.3 245 33.9
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 7.7e-21 105.9 195 40.0
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 1.0e-20 105.5 244 31.6
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.7e-20 104.8 262 33.2
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 3.8e-20 103.6 215 35.8
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 6.5e-20 102.8 222 36.0
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 2.5e-19 100.9 213 37.1
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 2.5e-19 100.9 162 40.1
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 4.2e-19 100.1 262 32.1
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.5e-19 99.8 257 35.0
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 7.2e-19 99.4 230 30.9
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 9.4e-19 99.0 258 30.2
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 9.4e-19 99.0 226 35.0
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 1.2e-18 98.6 259 31.7
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.6e-18 98.2 270 32.2
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 2.1e-18 97.8 283 31.8
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.1e-18 97.8 257 34.6
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 2.7e-18 97.4 245 33.5
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 3.6e-18 97.1 173 38.7
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.7e-18 96.7 236 30.1
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 6.1e-18 96.3 261 31.4
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 8.0e-18 95.9 257 33.1
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 8.0e-18 95.9 270 31.5
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 1.8e-17 94.7 283 30.7
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 1.8e-17 94.7 257 31.9
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 2.3e-17 94.4 185 33.0
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 3.0e-17 94.0 203 35.5
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 5.2e-17 93.2 261 28.0
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 6.7e-17 92.8 250 30.4
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 1.5e-16 91.7 258 32.2
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 1.5e-16 91.7 218 32.1
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 1.5e-16 91.7 263 27.8
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 2.0e-16 91.3 228 33.3
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 4.4e-16 90.1 171 35.7
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 4.4e-16 90.1 263 27.4
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 5.7e-16 89.7 218 34.9
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.2e-15 87.8 226 34.1
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 2.8e-15 87.4 181 30.9
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 6.3e-15 86.3 253 32.0
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 9.1e-14 82.4 198 33.3
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 1.2e-13 82.0 199 33.7
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 1.2e-13 82.0 221 30.8
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 2.0e-13 81.3 221 30.8
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 2.6e-13 80.9 247 30.8
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 3.5e-13 80.5 276 30.1
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 4.5e-13 80.1 246 29.3
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 7.7e-13 79.3 233 33.0
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 7.7e-13 79.3 255 32.2
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 1.0e-12 79.0 212 29.7
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 1.7e-12 78.2 225 28.9
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 2.2e-12 77.8 206 30.1
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.2e-12 77.8 220 32.7
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 8.5e-12 75.9 225 28.4
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 1.1e-11 75.5 198 32.8
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 7.2e-11 72.8 167 36.5
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 1.6e-10 71.6 255 29.0
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 2.1e-10 71.2 241 28.2
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 6.1e-10 69.7 220 30.9
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 8.0e-10 69.3 111 41.4
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 1.0e-09 68.9 205 33.2
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 3.0e-09 67.4 225 27.6
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 4.0e-09 67.0 270 25.2
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 4.0e-09 67.0 242 30.6
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 3.4e-08 63.9 239 29.3
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 9.7e-08 62.4 211 28.4
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 2.8e-07 60.8 219 28.8
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 1.1e-06 58.9 211 30.3
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 3.1e-06 57.4 232 28.0
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 9.1e-06 55.8 140 37.1


User provided reference genes

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