Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2055 Fragaria x ananassa HOM05D007879 ORTHO05D000440 0.0e+00 1210.3 600 100.0
FAN15G3739 Fragaria x ananassa HOM05D007879 ORTHO05D000440 0.0e+00 1210.3 600 100.0
FAN27G1010 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.0e-252 876.7 639 73.7
FvH4_2g24380 Fragaria vesca HOM05D007879 ORTHO05D000440 2.3e-135 486.9 315 81.3
FvH4_2g24391 Fragaria vesca HOM05D007879 ORTHO05D000440 2.1e-128 463.8 323 75.5
FvH4_2g24390 Fragaria vesca HOM05D007879 ORTHO05D000440 2.2e-106 390.6 317 67.8
FAN27G0844 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.3e-85 321.6 186 87.1
FAN24G0183 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.8e-84 317.8 639 39.0
FvH4_2g24410 Fragaria vesca HOM05D007879 ORTHO05D000440 5.5e-81 306.2 313 56.9
FAN15G1295 Fragaria x ananassa HOM05D007879 ORTHO05D000440 5.0e-74 283.1 630 34.9
FAN27G2132 Fragaria x ananassa HOM05D007879 ORTHO05D000440 3.0e-63 247.3 633 32.7
FAN15G1025 Fragaria x ananassa HOM05D007879 ORTHO05D000440 2.7e-48 197.6 203 56.7
FAN15G1476 Fragaria x ananassa HOM05D007879 ORTHO05D000440 2.7e-48 197.6 203 56.7
ECA247G0474 Erigeron canadensis HOM05D007879 ORTHO05D000440 8.8e-47 192.6 685 27.0
MD11G1297700 Malus domestica HOM05D007879 ORTHO05D000440 2.2e-45 188.0 308 40.3
QL07p015836 Quercus lobata HOM05D007879 ORTHO05D000440 4.8e-45 186.8 279 41.9
QL12p023875 Quercus lobata HOM05D007879 ORTHO05D000440 4.8e-45 186.8 279 41.9
RcHm_v2.0_Chr6g0292521 Rosa chinensis HOM05D007879 ORTHO05D000440 2.4e-44 184.5 302 43.0
Dinv32989 Davidia involucrata HOM05D007879 ORTHO05D000440 5.5e-41 173.3 285 40.7
Cfa006040 Carpinus fangiana HOM05D007879 ORTHO05D000440 1.0e-39 169.1 288 39.9
Haze_04806 Corylus avellana HOM05D007879 ORTHO05D000440 4.0e-39 167.2 296 38.9
FvH4_2g24700 Fragaria vesca HOM05D007879 ORTHO05D000440 8.8e-39 166.0 289 39.4
FAN20G2795 Fragaria x ananassa HOM05D007879 ORTHO05D000440 3.4e-38 164.1 312 39.1
Prupe.8G252000 Prunus persica HOM05D007879 ORTHO05D000440 7.5e-38 162.9 307 41.7
Haze_04807 Corylus avellana HOM05D007879 ORTHO05D000440 3.1e-36 157.5 288 38.2
Cfa006049 Carpinus fangiana HOM05D007879 ORTHO05D000440 4.1e-36 157.1 297 37.4
Thecc.01G290000 Theobroma cacao HOM05D007879 ORTHO05D000440 7.0e-36 156.4 291 40.2
TWI59G0016 Tripterygium wilfordii HOM05D007879 ORTHO05D000440 5.9e-35 153.3 283 38.5
TWI59G0406 Tripterygium wilfordii HOM05D007879 ORTHO05D000440 1.0e-34 152.5 283 38.2
FvH4_2g24690 Fragaria vesca HOM05D007879 ORTHO05D000440 2.3e-34 151.4 199 43.7
Lalb_Chr20g0121241 Lupinus albus HOM05D007879 ORTHO05D000440 2.3e-34 151.4 268 35.8
Actinidia00702 Actinidia chinensis HOM05D007879 ORTHO05D000440 6.6e-34 149.8 290 36.2
QL07p015844 Quercus lobata HOM05D007879 ORTHO05D000440 1.5e-33 148.7 272 37.9
QL93p0358_0007 Quercus lobata HOM05D007879 ORTHO05D000440 1.5e-33 148.7 272 37.9
QL12p023883 Quercus lobata HOM05D007879 ORTHO05D000440 7.2e-33 146.4 263 36.9
Rhsim13G0017600 Rhododendron simsii HOM05D007879 ORTHO05D000440 8.0e-32 142.9 259 36.3
Gohir.A12G008500 Gossypium hirsutum HOM05D007879 ORTHO05D000440 1.8e-31 141.7 282 36.9
Gorai.008G008000 Gossypium raimondii HOM05D007879 ORTHO05D000440 3.0e-31 141.0 282 36.5
Gohir.D12G008200 Gossypium hirsutum HOM05D007879 ORTHO05D000440 4.0e-31 140.6 282 36.5
Ciclev10021313m.g Citrus clementina HOM05D007879 ORTHO05D000440 5.2e-31 140.2 297 35.4
Gohir.D08G080050 Gossypium hirsutum HOM05D007879 ORTHO05D000440 9.8e-30 136.0 258 38.8
Gorai.004G085100 Gossypium raimondii HOM05D007879 ORTHO05D000440 1.7e-29 135.2 270 37.4
Phvul.006G176940 Phaseolus vulgaris HOM05D007879 ORTHO05D000440 2.0e-27 128.3 292 33.6
Manes.01G213200 Manihot esculenta HOM05D007879 ORTHO05D000440 5.9e-27 126.7 295 30.5
VMungo0540G1869 Vigna mungo HOM05D007879 ORTHO05D000440 7.8e-27 126.3 295 33.6
Glyma.13G230700 Glycine max HOM05D007879 ORTHO05D000440 2.3e-26 124.8 301 31.6
Lj6g0010361 Lotus japonicus HOM05D007879 ORTHO05D000440 6.6e-26 123.2 309 33.0
Sopen09g029230 Solanum pennellii HOM05D007879 ORTHO05D000440 7.3e-25 119.8 301 31.9
Glyma.15G081900 Glycine max HOM05D007879 ORTHO05D000440 1.2e-24 119.0 283 29.7
Solyc09g074390.3 Solanum lycopersicum HOM05D007879 ORTHO05D000440 2.1e-24 118.2 301 31.6
CiPaw.08G100600 Carya illinoinensis HOM05D007879 ORTHO05D000440 1.0e-23 115.9 224 29.9
PGSC0003DMG400016851 Solanum tuberosum HOM05D007879 ORTHO05D000440 1.0e-23 115.9 294 32.0
VMungo0540G0831 Vigna mungo HOM05D007879 ORTHO05D000440 1.0e-23 115.9 307 30.6
Nitab4.5_0003563g0060 Nicotiana tabacum HOM05D007879 ORTHO05D000440 5.2e-23 113.6 265 30.2
Phvul.006G177000 Phaseolus vulgaris HOM05D007879 ORTHO05D000440 8.9e-23 112.8 305 31.1
COL.COLO4_08033 Corchorus olitorius HOM05D000182 ORTHO05D000112 1.5e-22 112.1 199 36.7
Peaxi162Scf00067g00024 Petunia axillaris HOM05D007879 ORTHO05D000440 2.0e-22 111.7 292 30.5
Lsat_1_v5_gn_9_9700 Lactuca sativa HOM05D007879 ORTHO05D000440 5.8e-22 110.2 300 28.0
Nitab4.5_0002011g0070 Nicotiana tabacum HOM05D007879 ORTHO05D000440 1.3e-21 109.0 196 35.2
Medtr2g015760 Medicago truncatula HOM05D007879 ORTHO05D000440 2.2e-21 108.2 219 32.9
CAN.G426.14 Capsicum annuum HOM05D007879 ORTHO05D000440 2.9e-21 107.8 274 29.9
Cfa006043 Carpinus fangiana HOM05D007879 ORTHO05D000440 2.9e-21 107.8 248 31.9
arahy.Tifrunner.gnm1.ann1.J3G7Y5 Arachis hypogaea HOM05D007879 ORTHO05D000440 6.4e-21 106.7 231 34.6
Lj4g0024835 Lotus japonicus HOM05D007879 ORTHO05D000440 1.4e-20 105.5 227 34.8
arahy.Tifrunner.gnm1.ann1.AR7BJJ Arachis hypogaea HOM05D007879 ORTHO05D000440 1.2e-19 102.4 231 33.3
PSO832G2385 Papaver somniferum HOM05D007879 ORTHO05D000440 1.7e-18 98.6 180 35.6
arahy.Tifrunner.gnm1.ann1.4C4IKF Arachis hypogaea HOM05D007879 ORTHO05D000440 3.9e-18 97.4 159 38.4
PSO210G5716 Papaver somniferum HOM05D007879 ORTHO05D000440 1.9e-17 95.1 303 28.7
HanXRQChr10g0281401 Helianthus annuus HOM05D007879 ORTHO05D000440 5.6e-17 93.6 297 27.6
Glyma.15G081800 Glycine max HOM05D007879 ORTHO05D000440 9.5e-17 92.8 183 35.0
Prupe.4G274600 Prunus persica HOM05D007879 ORTHO05D000440 1.7e-13 82.0 171 33.3
TAR636G3329 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.7e-13 82.0 208 31.7
FvH4_2g24671 Fragaria vesca HOM05D007879 ORTHO05D000440 2.4e-12 78.2 149 38.3
Nitab4.5_0008240g0020 Nicotiana tabacum HOM05D007879 ORTHO05D000440 9.2e-12 76.3 142 35.9
TAR636G2857 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.6e-11 75.5 220 28.2
TAR636G2462 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.8e-11 73.2 215 29.3
Hund03994 Selenicereus undatus HOM05D001286 ORTHO05D000440 3.9e-10 70.9 200 29.5
Haze_09881 Corylus avellana HOM05D001286 ORTHO05D000440 7.3e-09 66.6 227 28.6
arahy.Tifrunner.gnm1.ann1.0QMX18 Arachis hypogaea HOM05D007879 ORTHO05D000440 9.5e-09 66.2 111 37.8
Haze_19622 Corylus avellana HOM05D001286 ORTHO05D000440 6.2e-08 63.5 198 25.8
QL04p032678 Quercus lobata HOM05D001286 ORTHO05D000440 6.2e-08 63.5 145 28.3
Sabra06G0163600 Salix brachista HOM05D001286 ORTHO05D000440 1.1e-07 62.8 153 30.7
Cfa021905 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.4e-07 62.4 269 26.0
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.4e-07 62.4 114 31.6
Thecc.07G029900 Theobroma cacao HOM05D001286 ORTHO05D000440 1.8e-07 62.0 188 26.6
PGR142G0506 Punica granatum HOM05D001286 ORTHO05D000440 2.3e-07 61.6 189 27.0
HPP92_013708 Vanilla planifolia HOM05D001286 ORTHO05D000440 2.3e-07 61.6 137 32.8
Potri.006G212600 Populus trichocarpa HOM05D001286 ORTHO05D000440 4.0e-07 60.8 153 30.1
TAR636G0782 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.0e-07 60.8 138 31.9
Ah.08g210520 Amaranthus hybridus HOM05D001286 ORTHO05D000440 5.2e-07 60.5 99 35.4
MBI14_g22986_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 5.2e-07 60.5 168 27.4
PGR142G1600 Punica granatum HOM05D001286 ORTHO05D000440 5.2e-07 60.5 149 28.9
BcaC09g47800 Brassica carinata HOM05D001487 ORTHO05D001365 8.9e-07 59.7 111 31.5
Gohir.A01G205800 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.9e-07 59.7 103 35.9
Gohir.D01G195200 Gossypium hirsutum HOM05D001286 ORTHO05D000440 8.9e-07 59.7 103 35.9
Gorai.002G239400 Gossypium raimondii HOM05D001286 ORTHO05D000440 8.9e-07 59.7 103 35.9
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 8.9e-07 59.7 115 35.7
TAR374G0203 Trochodendron aralioides HOM05D001286 ORTHO05D000440 8.9e-07 59.7 123 27.6
DCAR_020742 Daucus carota HOM05D001286 ORTHO05D000440 1.2e-06 59.3 140 31.4
CiPaw.10G010500 Carya illinoinensis HOM05D001286 ORTHO05D000440 1.5e-06 58.9 101 34.7
Rhsim10G0179200 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-06 58.9 165 26.7
TWI12G1091 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 2.0e-06 58.5 198 27.3
ATR0851G001 Amborella trichopoda HOM05D001286 ORTHO05D000440 2.6e-06 58.2 153 28.1
Phvul.001G190800 Phaseolus vulgaris HOM05D001286 ORTHO05D000440 2.6e-06 58.2 103 33.0
Duzib093G1514 Durio zibethinus HOM05D001286 ORTHO05D000440 3.4e-06 57.8 103 35.9
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 3.4e-06 57.8 103 30.1
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 3.4e-06 57.8 118 29.7
RcHm_v2.0_Chr3g0473881 Rosa chinensis HOM05D001286 ORTHO05D000440 3.4e-06 57.8 142 29.6
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.4e-06 57.8 235 24.7
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.4e-06 57.8 114 30.7
Ca_09011_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 4.4e-06 57.4 121 27.3
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 4.4e-06 57.4 106 34.0
Prupe.8G252900 Prunus persica HOM05D001286 ORTHO05D000440 4.4e-06 57.4 110 34.5
PSO017G5637 Papaver somniferum HOM05D003035 ORTHO05D000440 5.8e-06 57.0 137 29.2
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 5.8e-06 57.0 133 28.6
QL02p058170 Quercus lobata HOM05D001286 ORTHO05D000440 5.8e-06 57.0 207 26.6
Rhsim01G0011200 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.8e-06 57.0 129 30.2
Sc20g0006330 Simmondsia chinensis HOM05D001286 ORTHO05D000440 5.8e-06 57.0 99 33.3
VMungo1383G3108 Vigna mungo HOM05D001286 ORTHO05D000440 5.8e-06 57.0 210 26.2
Cfa016618 Carpinus fangiana HOM05D001286 ORTHO05D000440 7.6e-06 56.6 101 32.7
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 7.6e-06 56.6 143 28.7
Rhsim02G0223700 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.6e-06 56.6 178 30.9
AL6G44750 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 9.9e-06 56.2 98 33.7
A09p10860 Brassica napus HOM05D001286 ORTHO05D000440 9.9e-06 56.2 142 31.0
CARHR224270 Cardamine hirsuta HOM05D001487 ORTHO05D001365 9.9e-06 56.2 191 25.1
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.9e-06 56.2 118 29.7


User provided reference genes

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