Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.0e-171 604.7 323 100.0
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.2e-169 599.0 323 99.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.1e-168 596.7 323 98.8
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.3e-156 556.6 323 91.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.2e-137 492.7 325 82.5
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.1e-125 453.8 325 76.9
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.8e-124 448.4 330 74.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.6e-122 442.6 330 74.2
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 3.4e-122 442.2 328 74.7
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 5.9e-122 441.4 330 74.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 2.9e-121 439.1 326 73.3
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 7.2e-120 434.5 325 72.9
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 2.7e-119 432.6 325 71.4
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.6e-119 432.2 324 72.5
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 4.6e-119 431.8 325 73.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 6.1e-119 431.4 326 72.4
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.6e-117 426.0 329 70.2
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 7.4e-117 424.5 327 70.6
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.4e-117 424.5 250 91.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.7e-116 423.3 293 76.8
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 8.2e-116 421.0 347 68.0
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.1e-115 420.6 327 70.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.8e-115 419.9 326 71.2
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.8e-115 419.9 331 71.3
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 7.7e-114 414.5 328 70.7
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.7e-113 413.3 319 72.4
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 2.9e-113 412.5 331 69.2
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.9e-113 412.5 332 69.3
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.8e-113 412.1 321 71.7
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.1e-112 410.6 323 70.6
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.2e-112 409.1 325 69.5
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.2e-112 409.1 322 69.9
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 5.5e-112 408.3 331 68.3
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 7.2e-112 407.9 335 67.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.6e-111 406.8 351 65.5
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.6e-111 406.8 318 70.4
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 2.1e-111 406.4 331 67.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.1e-111 404.8 312 70.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.0e-110 404.1 260 79.6
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.4e-110 403.7 332 67.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.8e-110 403.3 327 67.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.8e-110 403.3 254 80.7
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 3.0e-110 402.5 323 68.7
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.1e-109 400.6 331 68.3
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.0e-109 399.8 293 75.4
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.3e-109 399.1 330 68.8
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 3.3e-109 399.1 320 69.1
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.4e-109 398.7 249 81.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 5.7e-109 398.3 329 68.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.3e-108 397.1 250 81.6
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.7e-108 396.7 326 68.4
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.8e-108 396.0 321 68.2
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.8e-108 395.2 319 69.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 8.2e-108 394.4 327 69.1
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 8.2e-108 394.4 327 69.7
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 8.2e-108 394.4 328 66.2
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.1e-107 394.0 320 66.6
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.4e-107 393.7 256 78.9
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.8e-107 393.3 321 68.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.8e-107 393.3 275 75.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.8e-107 393.3 259 78.8
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 3.1e-107 392.5 324 67.9
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.2e-106 390.6 327 66.7
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.6e-106 390.2 325 67.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.0e-106 389.8 329 66.0
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.5e-106 388.7 325 66.8
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 7.7e-106 387.9 259 77.6
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 2.2e-105 386.3 294 70.7
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 3.8e-105 385.6 290 72.1
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 3.8e-105 385.6 322 65.2
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 6.5e-105 384.8 329 66.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 8.5e-105 384.4 323 66.3
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.1e-104 384.0 367 60.8
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.5e-104 382.9 328 66.8
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 4.2e-104 382.1 285 71.6
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.1e-103 379.8 332 66.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 8.0e-103 377.9 295 70.5
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.4e-102 377.1 327 66.1
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.3e-102 376.3 235 81.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 8.8e-102 374.4 298 67.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.0e-101 373.2 326 66.6
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.3e-100 370.5 320 63.8
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.7e-100 370.2 238 78.6
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.2e-100 369.8 322 63.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-99 367.5 359 60.4
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.1e-99 365.5 343 63.0
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 5.0e-97 358.6 295 66.1
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.2e-96 355.5 317 63.1
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.4e-91 338.6 324 59.6
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.7e-90 336.3 221 73.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 4.5e-90 335.5 258 71.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 4.2e-88 328.9 235 70.2
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 6.1e-87 325.1 262 68.7
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 8.0e-87 324.7 334 59.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 9.2e-83 311.2 221 76.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 9.5e-80 301.2 216 66.2
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.4e-78 297.4 261 65.5
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.8e-78 297.0 287 59.6
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 6.0e-74 282.0 239 66.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.0e-73 281.2 213 71.4
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.1e-71 273.5 327 48.0
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 4.4e-69 265.8 253 52.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.6e-66 255.8 260 50.0
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.8e-63 246.5 251 50.6
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.3e-62 243.4 265 49.4
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.0e-57 226.5 259 45.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.0e-57 226.5 257 48.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-54 218.0 129 86.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.2e-54 215.7 253 44.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.3e-49 201.1 269 41.3
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.7e-44 184.1 246 44.3
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.1e-43 178.7 165 64.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.9e-40 170.6 123 72.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 4.3e-40 169.5 246 37.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-24 118.2 244 29.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 7.4e-24 115.5 321 35.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 4.5e-21 106.3 254 30.7
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 4.1e-06 56.6 32 87.5
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.1e-06 56.6 52 57.7


User provided reference genes

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