Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.2e-132 474.2 247 100.0
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.4e-129 463.8 249 98.0
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.3e-126 455.7 249 96.8
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 6.9e-123 444.1 259 92.3
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.5e-117 425.6 259 87.6
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.8e-99 366.3 259 73.4
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 3.0e-94 349.0 259 70.7
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 6.1e-87 324.7 258 65.5
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.0e-86 323.9 258 64.7
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 3.4e-85 318.9 259 64.9
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 4.4e-85 318.5 261 64.4
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 4.4e-85 318.5 259 64.9
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.3e-81 307.0 258 60.9
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 1.5e-80 303.5 257 61.1
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.5e-80 302.8 259 62.9
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 5.5e-80 301.6 241 64.7
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 4.7e-79 298.5 259 61.0
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.8e-78 296.6 237 64.6
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.2e-76 289.7 259 61.8
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 2.9e-76 289.3 263 59.7
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.8e-75 286.6 260 60.8
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.8e-75 286.6 251 61.8
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.8e-75 286.6 247 60.3
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 3.2e-75 285.8 257 58.4
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.1e-75 285.4 259 58.7
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 5.4e-75 285.0 260 60.4
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 2.7e-74 282.7 230 64.3
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 3.5e-74 282.3 258 57.4
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 3.5e-74 282.3 251 59.0
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 4.6e-74 282.0 248 58.9
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 4.6e-74 282.0 258 56.2
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 5.9e-74 281.6 241 63.1
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 1.7e-73 280.0 252 60.7
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 3.9e-73 278.9 263 58.9
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 3.9e-73 278.9 258 58.1
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 5.0e-73 278.5 249 58.6
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 6.6e-73 278.1 261 58.2
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.1e-72 277.3 258 56.2
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.9e-72 276.6 258 56.2
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 2.5e-72 276.2 256 55.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 3.3e-72 275.8 251 60.2
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 9.5e-72 274.2 212 66.5
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.2e-71 273.9 292 53.8
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.1e-71 273.1 258 55.0
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 3.6e-71 272.3 257 56.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 3.6e-71 272.3 261 55.2
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 3.6e-71 272.3 251 58.6
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 3.6e-71 272.3 261 56.7
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 4.7e-71 271.9 262 55.0
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.0e-70 270.8 260 58.8
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.8e-70 270.0 260 54.6
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.3e-70 269.6 241 58.5
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 3.1e-70 269.2 262 54.2
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 3.1e-70 269.2 262 54.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 3.1e-70 269.2 250 59.2
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 6.8e-70 268.1 252 58.3
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 8.9e-70 267.7 248 57.7
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 1.2e-69 267.3 258 57.0
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 1.2e-69 267.3 256 55.9
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 3.4e-69 265.8 257 56.8
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 9.8e-69 264.2 258 54.7
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 9.8e-69 264.2 258 54.7
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 1.7e-68 263.5 284 50.7
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 6.4e-68 261.5 236 58.9
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.1e-67 260.8 259 54.4
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.1e-67 260.8 248 58.5
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.9e-67 260.0 245 53.9
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 3.2e-67 259.2 248 56.0
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 4.1e-67 258.8 263 53.6
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.2e-66 257.3 260 52.3
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 6.0e-66 255.0 258 53.9
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 7.8e-66 254.6 240 55.8
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 1.0e-65 254.2 246 54.1
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.0e-65 254.2 242 55.0
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.3e-65 253.8 255 52.9
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 3.0e-65 252.7 251 53.8
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 5.0e-65 251.9 251 53.4
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 6.6e-65 251.5 248 56.0
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 1.1e-64 250.8 237 58.6
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.9e-64 250.0 247 55.5
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 2.5e-64 249.6 232 58.2
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 5.6e-64 248.4 234 55.1
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 2.1e-63 246.5 259 50.6
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 2.8e-63 246.1 258 50.4
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 3.6e-63 245.7 173 74.0
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.1e-62 244.2 231 57.1
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.8e-62 243.4 248 52.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 8.9e-62 241.1 229 59.0
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.3e-60 237.3 229 58.1
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 2.7e-58 229.6 224 55.8
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 3.5e-58 229.2 210 58.1
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.7e-57 226.9 260 49.2
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 8.6e-57 224.6 258 48.8
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 1.4e-54 217.2 188 56.9
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 9.2e-51 204.5 192 54.7
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 5.1e-49 198.7 254 48.4
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 8.6e-49 198.0 260 47.3
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 1.4e-46 190.7 232 46.6
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 9.9e-45 184.5 326 40.2
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 9.3e-43 177.9 162 57.4
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-42 176.4 116 84.5
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-42 176.4 116 84.5
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-41 173.7 134 62.7
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.6e-41 171.8 92 98.9
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 1.8e-38 163.7 133 60.2
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 4.4e-37 159.1 238 41.2
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 9.0e-30 134.8 142 50.0
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 4.9e-28 129.0 180 46.1
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.5e-21 107.5 192 38.5
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 3.4e-21 106.3 154 40.3
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.3e-20 104.4 95 52.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 1.1e-19 101.3 129 43.4
FvH4_5g31640 Fragaria vesca HOM05D006609 ORTHO05D046171 2.1e-15 87.0 54 85.2
FAN18G4502 Fragaria x ananassa HOM05D006609 ORTHO05D046171 1.1e-14 84.7 74 67.6
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 4.1e-14 82.8 104 43.3
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 3.2e-11 73.2 88 39.8
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 9.3e-11 71.6 195 27.2
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 3.7e-07 59.7 72 48.6


User provided reference genes

Program Settings