Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.3e-80 301.2 148 100.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.0e-76 290.0 149 96.6
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.3e-76 289.7 149 96.0
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.7e-76 289.3 147 97.3
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.6e-74 282.7 149 94.0
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.3e-71 270.8 149 91.3
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 7.7e-45 184.1 154 61.7
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 2.6e-40 169.1 154 66.9
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 1.3e-39 166.8 154 59.1
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 9.5e-35 150.6 151 54.3
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 8.0e-34 147.5 150 56.7
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 5.8e-32 141.4 152 54.6
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 6.4e-31 137.9 145 53.1
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 9.2e-30 134.0 151 54.3
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.6e-29 133.3 147 49.7
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.3e-28 130.2 145 48.3
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 6.6e-28 127.9 147 51.7
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 6.6e-28 127.9 149 49.7
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 8.6e-28 127.5 150 49.3
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.5e-27 126.7 146 50.0
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.9e-27 126.3 156 48.1
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 3.3e-27 125.6 146 51.4
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 4.3e-27 125.2 146 46.6
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 5.6e-27 124.8 154 48.7
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 9.5e-27 124.0 150 48.0
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.2e-26 123.6 145 49.0
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 3.6e-26 122.1 150 46.7
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 4.7e-26 121.7 144 48.6
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 6.2e-26 121.3 145 49.0
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.1e-25 120.6 108 57.4
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.4e-25 120.2 152 46.7
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.8e-25 119.8 146 47.3
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 5.2e-25 118.2 155 46.5
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 8.9e-25 117.5 153 45.8
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 2.0e-24 116.3 107 55.1
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 9.8e-24 114.0 142 45.8
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 3.7e-23 112.1 152 42.1
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 3.7e-23 112.1 158 45.6
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 4.9e-23 111.7 150 44.0
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 6.4e-23 111.3 121 47.1
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 1.1e-22 110.5 147 43.5
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 1.4e-22 110.2 156 44.2
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.9e-22 109.8 144 45.8
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 7.0e-22 107.8 147 44.9
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 7.8e-21 104.4 145 43.4
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.0e-20 104.0 136 45.6
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.7e-20 103.2 156 42.9
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 2.3e-20 102.8 150 41.3
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.1e-19 100.5 150 44.7
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 4.3e-19 98.6 159 39.6
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 1.2e-18 97.1 158 40.5
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.1e-18 96.3 151 43.7
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 3.6e-18 95.5 161 38.5
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 3.6e-18 95.5 151 39.7
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.8e-17 93.2 159 39.6
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 2.3e-17 92.8 103 52.4
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 3.1e-17 92.4 138 42.8
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 6.8e-17 91.3 146 39.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 8.9e-17 90.9 120 44.2
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 1.2e-16 90.5 146 41.8
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.5e-16 90.1 158 39.9
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.5e-16 90.1 161 36.6
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 2.0e-16 89.7 144 40.3
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 2.6e-16 89.4 151 37.7
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.4e-16 88.6 116 45.7
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.4e-16 88.6 149 38.3
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 5.8e-16 88.2 162 35.2
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 7.5e-16 87.8 139 41.0
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 9.9e-16 87.4 145 40.0
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.7e-15 86.7 165 40.0
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 2.9e-15 85.9 158 40.5
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 6.4e-15 84.7 147 39.5
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 8.3e-15 84.3 163 39.3
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.1e-14 84.0 155 40.0
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 1.4e-14 83.6 147 38.8
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.9e-14 83.2 151 39.1
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 3.2e-14 82.4 146 36.3
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 5.4e-14 81.6 147 38.1
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 9.2e-14 80.9 147 37.4
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 1.2e-13 80.5 158 39.2
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 2.1e-13 79.7 60 60.0
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 4.6e-13 78.6 147 38.1
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 4.6e-13 78.6 147 38.1
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 4.6e-13 78.6 147 38.1
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 4.6e-13 78.6 150 39.3
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 6.0e-13 78.2 107 45.8
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 7.8e-13 77.8 136 36.8
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.0e-12 77.4 152 37.5
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 2.3e-12 76.3 95 46.3
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 6.6e-12 74.7 156 35.3
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 8.6e-12 74.3 147 36.1
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 5.6e-11 71.6 126 35.7
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 5.6e-11 71.6 65 55.4
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 7.3e-11 71.2 155 36.1
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 9.5e-11 70.9 70 54.3
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 3.6e-10 68.9 147 34.0
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 3.6e-10 68.9 112 38.4
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.7e-10 68.6 120 36.7
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 4.0e-09 65.5 72 47.2
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 8.9e-09 64.3 45 64.4
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 4.9e-07 58.5 108 34.3
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 4.9e-07 58.5 78 39.7
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 8.4e-07 57.8 41 56.1


User provided reference genes

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