Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.5e-181 639.4 337 100.0
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.4e-174 616.3 337 96.4
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 2.7e-170 602.1 337 94.7
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.3e-169 599.7 338 94.7
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 5.1e-161 571.2 337 86.6
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 8.2e-135 484.2 338 80.5
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 4.6e-53 212.6 409 40.8
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 3.9e-52 209.5 379 40.6
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 1.3e-47 194.5 388 38.7
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-43 181.4 344 38.4
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 6.5e-39 165.6 375 35.2
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 2.1e-37 160.6 386 36.0
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 6.1e-37 159.1 404 35.6
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 1.8e-33 147.5 417 33.6
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 3.2e-30 136.7 257 41.6
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 5.5e-30 136.0 240 38.8
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 7.2e-30 135.6 263 39.2
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 2.7e-29 133.7 396 32.1
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 3.6e-29 133.3 274 38.3
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 6.1e-29 132.5 387 31.8
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 7.9e-29 132.1 387 31.5
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 1.0e-28 131.7 377 32.9
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 3.0e-28 130.2 371 33.2
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 6.7e-28 129.0 378 31.2
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 2.2e-26 124.0 379 32.5
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 4.8e-26 122.9 275 36.4
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 6.3e-26 122.5 260 35.4
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 1.8e-25 120.9 276 36.2
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 2.4e-25 120.6 260 38.8
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.2e-24 118.2 274 35.8
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.6e-24 117.9 333 31.2
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 5.9e-24 115.9 412 29.9
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 5.9e-24 115.9 377 29.7
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 1.3e-23 114.8 187 43.3
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.7e-23 114.4 245 36.3
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 1.7e-23 114.4 185 42.7
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 2.2e-23 114.0 234 39.7
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 6.5e-23 112.5 262 37.0
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 1.1e-22 111.7 271 34.3
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 1.5e-22 111.3 384 30.5
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 1.9e-22 110.9 232 37.5
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 2.5e-22 110.5 392 32.4
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 2.5e-22 110.5 217 37.3
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 7.2e-22 109.0 240 36.7
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 3.6e-21 106.7 376 30.3
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 4.7e-21 106.3 341 32.3
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 4.7e-21 106.3 251 39.0
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 1.8e-20 104.4 366 30.9
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 5.2e-20 102.8 340 32.4
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 7.5e-19 99.0 255 35.7
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 1.7e-18 97.8 250 35.6
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 4.8e-18 96.3 253 35.2
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 1.2e-16 91.7 202 37.1
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 1.2e-16 91.7 257 32.3
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 3.5e-16 90.1 194 36.6
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.3e-15 88.2 183 39.9
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 1.7e-15 87.8 207 36.2
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 1.7e-15 87.8 92 54.3
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 2.2e-15 87.4 174 37.9
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 2.9e-15 87.0 192 36.5
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 2.5e-14 84.0 173 37.6
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 4.2e-14 83.2 248 34.3
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 5.5e-14 82.8 201 33.8
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 7.2e-14 82.4 245 33.5
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 9.4e-14 82.0 244 32.8
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 9.4e-14 82.0 203 35.0
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 1.2e-13 81.6 338 27.5
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.6e-13 81.3 201 35.8
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 1.4e-12 78.2 207 33.3
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 5.2e-12 76.3 192 35.9
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 5.7e-11 72.8 90 53.3
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 5.7e-11 72.8 193 35.2
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.7e-10 71.2 256 30.5
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 2.8e-10 70.5 213 33.8
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 3.7e-10 70.1 189 34.9
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 8.3e-10 68.9 154 35.7
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 4.1e-09 66.6 121 41.3
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 9.1e-09 65.5 115 42.6
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 1.2e-08 65.1 249 32.1
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 8.5e-07 58.9 268 29.5
HPP92_022826 Vanilla planifolia HOM05D002733 ORTHO05D010023 4.2e-06 56.6 84 44.0


User provided reference genes

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