Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.0e-290 1001.1 511 100.0
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.7e-264 914.4 469 99.6
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 1.6e-262 909.1 468 99.1
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.6e-262 909.1 469 99.1
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 1.3e-256 889.4 469 96.6
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 1.6e-230 802.7 469 86.8
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 6.0e-230 800.8 468 85.9
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 2.8e-227 792.0 469 84.6
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 3.1e-226 788.5 469 84.2
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 5.3e-226 787.7 466 83.9
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 4.9e-224 781.2 471 83.4
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.9e-223 779.2 483 81.6
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 3.2e-223 778.5 468 83.5
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 4.2e-223 778.1 470 83.8
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 2.7e-222 775.4 469 83.4
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 3.5e-222 775.0 471 81.7
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 2.3e-221 772.3 471 82.8
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 3.9e-221 771.5 464 83.0
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 3.9e-221 771.5 469 81.9
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 5.1e-221 771.2 471 81.5
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 1.1e-220 770.0 469 82.7
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 1.5e-220 769.6 469 81.9
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 5.7e-220 767.7 469 82.1
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 5.7e-220 767.7 469 82.3
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 7.4e-220 767.3 471 81.3
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 2.8e-219 765.4 469 82.5
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 2.8e-219 765.4 469 82.5
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 6.3e-219 764.2 468 82.5
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 1.1e-218 763.5 469 81.7
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 4.1e-218 761.5 469 82.1
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 4.1e-218 761.5 469 82.3
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 1.5e-217 759.6 469 81.9
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 1.5e-217 759.6 469 81.7
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 2.6e-217 758.8 469 81.9
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 3.4e-217 758.4 469 81.4
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 3.4e-217 758.4 469 81.7
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 5.9e-217 757.7 469 80.6
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 2.2e-216 755.7 468 81.2
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 2.9e-216 755.4 504 76.2
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 5.0e-216 754.6 469 81.2
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 5.0e-216 754.6 468 81.4
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 1.4e-215 753.1 468 81.6
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 1.9e-215 752.7 468 81.8
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.9e-215 752.7 469 80.4
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 5.5e-215 751.1 468 81.6
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 1.2e-214 750.0 468 80.3
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 1.2e-214 750.0 469 80.4
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 1.6e-214 749.6 470 80.6
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 1.6e-214 749.6 468 80.8
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 1.6e-214 749.6 468 80.8
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 2.1e-214 749.2 470 80.4
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 6.1e-214 747.7 470 80.4
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.3e-213 746.5 468 79.9
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 1.3e-213 746.5 522 74.3
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 2.3e-213 745.7 469 80.2
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 3.0e-213 745.3 468 80.6
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 6.7e-213 744.2 469 78.9
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 3.3e-212 741.9 469 80.4
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 2.8e-211 738.8 484 78.1
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 4.8e-211 738.0 469 78.7
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 6.3e-211 737.6 470 80.0
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 6.3e-211 737.6 468 79.9
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.4e-210 736.5 469 78.0
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 1.4e-210 736.5 472 79.0
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 4.1e-210 734.9 469 79.5
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 3.8e-208 728.4 469 79.3
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 8.5e-208 727.2 468 79.3
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 8.5e-208 727.2 469 79.1
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 4.2e-207 724.9 469 79.5
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 5.5e-207 724.5 468 79.1
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 5.5e-207 724.5 575 68.2
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 2.1e-206 722.6 455 80.0
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 2.7e-206 722.2 469 78.3
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 2.3e-205 719.2 469 78.3
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 2.0e-204 716.1 468 77.6
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 2.0e-204 716.1 468 77.6
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 2.0e-204 716.1 468 77.6
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 2.0e-204 716.1 468 77.6
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 2.0e-204 716.1 468 77.6
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 2.6e-204 715.7 471 77.7
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 4.4e-204 714.9 468 77.8
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.3e-203 713.4 413 86.9
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 1.7e-203 713.0 468 77.4
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 3.1e-202 708.8 474 76.4
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 1.7e-200 703.0 468 77.1
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 6.5e-200 701.0 469 75.7
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 6.7e-197 691.0 468 75.4
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 6.7e-197 691.0 427 81.3
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 7.4e-196 687.6 469 74.8
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 3.8e-192 675.2 472 72.5
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 3.0e-189 665.6 487 69.6
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 2.0e-177 626.3 480 65.6
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 2.9e-176 622.5 467 69.6
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 1.5e-175 620.2 456 70.2
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 3.4e-164 582.4 975 40.5
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 4.1e-154 548.9 545 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 1.2e-153 547.4 410 66.6
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 1.9e-130 470.3 288 81.2
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 3.2e-130 469.5 298 79.9
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 3.5e-129 466.1 478 51.5
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 3.0e-120 436.4 264 83.0
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 3.7e-118 429.5 487 47.6
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 1.9e-111 407.1 487 45.6
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.2e-97 361.3 232 80.2
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 3.6e-81 306.6 291 59.5
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 1.5e-79 301.2 192 81.2
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 1.3e-75 288.1 293 56.3
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 2.5e-74 283.9 236 64.4
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 6.1e-73 279.3 234 58.5
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 3.7e-70 270.0 171 80.7
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 1.9e-66 257.7 198 69.2
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 1.2e-63 248.4 167 71.9
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.3e-56 224.2 334 44.6
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 8.3e-54 215.7 317 44.5
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 1.2e-49 201.8 136 76.5
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 1.2e-49 201.8 136 76.5
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 8.9e-40 169.1 118 75.4
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 2.9e-38 164.1 100 81.0
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 7.3e-18 96.3 64 76.6


User provided reference genes

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