Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1698 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.6e-68 261.9 133 100.0
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 1.8e-32 142.9 92 79.3
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 4.0e-32 141.7 99 80.8
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 1.3e-30 136.7 112 67.9
MD08G1058400 Malus domestica HOM05D003476 ORTHO05D004057 1.1e-29 133.7 88 78.4
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 1.1e-29 133.7 100 71.0
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 2.2e-27 125.9 89 69.7
BcaB02g09065 Brassica carinata HOM05D003476 ORTHO05D004057 2.9e-27 125.6 90 67.8
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 8.5e-27 124.0 91 68.1
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 1.1e-26 123.6 83 69.9
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 1.5e-26 123.2 98 63.3
Oeu039001.1 Olea europaea HOM05D003476 ORTHO05D004057 1.5e-26 123.2 79 73.4
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 1.5e-26 123.2 90 67.8
SalBow6G1938 Salvia bowleyana HOM05D003476 ORTHO05D004057 1.5e-26 123.2 82 69.5
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 2.5e-26 122.5 81 71.6
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 3.2e-26 122.1 86 72.1
Oeu039509.1 Olea europaea HOM05D003476 ORTHO05D004057 3.2e-26 122.1 79 72.2
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 3.2e-26 122.1 80 72.5
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 4.2e-26 121.7 91 64.8
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 5.5e-26 121.3 102 62.7
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 5.5e-26 121.3 95 69.5
RcHm_v2.0_Chr1g0369421 Rosa chinensis HOM05D003476 ORTHO05D004057 7.2e-26 120.9 85 65.9
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 7.2e-26 120.9 95 64.2
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 9.4e-26 120.6 88 65.9
ClCG07G004010 Citrullus lanatus HOM05D003476 ORTHO05D004057 9.4e-26 120.6 87 69.0
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 1.2e-25 120.2 86 69.8
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 1.2e-25 120.2 84 70.2
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 1.6e-25 119.8 74 75.7
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 1.6e-25 119.8 80 72.5
Lj1A950T61 Lonicera japonica HOM05D003476 ORTHO05D004057 1.6e-25 119.8 79 72.2
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 3.6e-25 118.6 98 61.2
Cc02_g06900 Coffea canephora HOM05D003476 ORTHO05D004057 3.6e-25 118.6 85 63.5
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 3.6e-25 118.6 86 69.8
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 3.6e-25 118.6 101 63.4
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 4.7e-25 118.2 90 63.3
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 4.7e-25 118.2 90 63.3
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 4.7e-25 118.2 86 68.6
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 4.7e-25 118.2 83 67.5
Actinidia13919 Actinidia chinensis HOM05D003476 ORTHO05D004057 6.1e-25 117.9 79 69.6
HanXRQChr08g0222281 Helianthus annuus HOM05D003476 ORTHO05D004057 6.1e-25 117.9 75 73.3
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 6.1e-25 117.9 98 61.2
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 6.1e-25 117.9 86 67.4
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 6.1e-25 117.9 75 74.7
Lsat_1_v5_gn_5_2880 Lactuca sativa HOM05D003476 ORTHO05D004057 8.0e-25 117.5 83 68.7
Prupe.2G246300 Prunus persica HOM05D003476 ORTHO05D004057 8.0e-25 117.5 84 65.5
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 8.0e-25 117.5 86 68.6
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 1.0e-24 117.1 101 62.4
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 1.0e-24 117.1 83 71.1
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 1.0e-24 117.1 81 69.1
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 1.0e-24 117.1 81 69.1
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 1.4e-24 116.7 81 67.9
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 1.4e-24 116.7 81 66.7
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 1.4e-24 116.7 95 61.1
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 1.8e-24 116.3 98 62.2
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 1.8e-24 116.3 92 62.0
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.3e-24 115.9 88 63.6
FAN06G4561 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.3e-24 115.9 86 65.1
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 2.3e-24 115.9 81 69.1
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 2.3e-24 115.9 88 61.4
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 2.3e-24 115.9 91 64.8
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 3.0e-24 115.5 99 63.6
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 3.0e-24 115.5 105 59.0
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 3.0e-24 115.5 81 67.9
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 3.0e-24 115.5 84 66.7
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 3.0e-24 115.5 98 63.3
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 3.0e-24 115.5 107 57.0
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 4.0e-24 115.2 86 62.8
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 4.0e-24 115.2 98 63.3
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 5.2e-24 114.8 81 64.2
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 6.8e-24 114.4 93 62.4
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 8.8e-24 114.0 83 65.1
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 8.8e-24 114.0 119 53.8
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 8.8e-24 114.0 74 71.6
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.2e-23 113.6 86 67.4
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 1.2e-23 113.6 84 67.9
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 1.2e-23 113.6 98 62.2
Atru.chr12.241 Acer truncatum HOM05D003476 ORTHO05D004057 1.5e-23 113.2 84 67.9
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 1.5e-23 113.2 84 65.5
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 1.5e-23 113.2 84 65.5
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 1.5e-23 113.2 86 66.3
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.5e-23 113.2 81 63.0
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 2.0e-23 112.8 114 50.9
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 2.0e-23 112.8 83 63.9
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 2.0e-23 112.8 98 62.2
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 2.0e-23 112.8 81 65.4
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 2.0e-23 112.8 93 62.4
CARHR134890 Cardamine hirsuta HOM05D003476 ORTHO05D004057 2.6e-23 112.5 87 66.7
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 2.6e-23 112.5 83 66.3
TAR633G0614 Trochodendron aralioides HOM05D003476 ORTHO05D004057 2.6e-23 112.5 87 65.5
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 3.4e-23 112.1 75 72.0
Sopen04g028030 Solanum pennellii HOM05D003476 ORTHO05D004057 3.4e-23 112.1 76 71.1
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 4.4e-23 111.7 86 67.4
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.4e-23 111.7 78 64.1
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.4e-23 111.7 78 64.1
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.4e-23 111.7 78 64.1
MD01G1147400 Malus domestica HOM05D003476 ORTHO05D004057 5.7e-23 111.3 83 68.7
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 9.8e-23 110.5 90 61.1
Cpa.g.c40050 Carica papaya HOM05D003476 ORTHO05D004057 9.8e-23 110.5 75 72.0
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 1.3e-22 110.2 86 64.0
CARHR253320 Cardamine hirsuta HOM05D003476 ORTHO05D004057 2.2e-22 109.4 85 60.0
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 3.7e-22 108.6 71 73.2
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 3.7e-22 108.6 80 68.8
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 3.7e-22 108.6 93 60.2
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 4.8e-22 108.2 116 52.6
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 4.8e-22 108.2 83 67.5
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 6.3e-22 107.8 86 65.1
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 8.3e-22 107.5 74 67.6
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 1.1e-21 107.1 83 66.3
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.1e-21 107.1 78 65.4
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 1.1e-21 107.1 86 65.1
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 1.4e-21 106.7 78 67.9
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 2.4e-21 105.9 80 63.8
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 3.1e-21 105.5 72 70.8
vmacro06993 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 3.1e-21 105.5 71 70.4
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 4.1e-21 105.1 89 61.8
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 4.1e-21 105.1 81 61.7
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 4.1e-21 105.1 80 61.2
Sc06g0000400 Simmondsia chinensis HOM05D003476 ORTHO05D004057 4.1e-21 105.1 77 63.6
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 4.1e-21 105.1 74 68.9
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 9.1e-21 104.0 78 64.1
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 1.6e-20 103.2 71 69.0
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 1.6e-20 103.2 74 64.9
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 2.0e-20 102.8 99 60.6
TAR636G3666 Trochodendron aralioides HOM05D003476 ORTHO05D004057 5.9e-20 101.3 90 58.9
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 7.7e-20 100.9 77 61.0
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 1.0e-19 100.5 76 63.2
ATR0618G113 Amborella trichopoda HOM05D003476 ORTHO05D004057 1.3e-19 100.1 78 64.1
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 1.3e-19 100.1 79 60.8
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 5.0e-19 98.2 74 63.5
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 6.6e-19 97.8 93 57.0
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 5.5e-18 94.7 78 59.0
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.6e-17 93.2 77 58.4
Pp3c24_20710 Physcomitrium patens HOM05D003476 ORTHO05D004057 4.7e-17 91.7 76 61.8
Pp3c8_24950 Physcomitrium patens HOM05D003476 ORTHO05D004057 1.0e-16 90.5 94 53.2
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.5e-15 86.7 68 63.2
MBI16_g28612_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 2.6e-15 85.9 79 50.6
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 7.5e-15 84.3 65 60.0
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 9.8e-15 84.0 74 56.8
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.3e-14 83.6 58 70.7
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 1.3e-14 83.6 58 70.7
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 3.7e-14 82.0 63 63.5
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 1.1e-13 80.5 68 58.8
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 1.8e-13 79.7 67 53.7
AagrBONN_evm.TU.Sc2ySwM_228.5500 Anthoceros agrestis HOM05D003476 ORTHO05D004057 4.1e-13 78.6 77 50.6
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 9.2e-13 77.4 66 53.0
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 5.9e-12 74.7 62 58.1
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 7.8e-12 74.3 69 56.5
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 1.7e-11 73.2 69 55.1
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 8.6e-11 70.9 61 59.0
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 8.6e-11 70.9 51 62.7
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 1.1e-10 70.5 61 62.3
Migut.F01424 Erythranthe guttata HOM05D003476 ORTHO05D004057 2.5e-10 69.3 68 54.4
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 5.6e-10 68.2 59 50.8
MBI14_g06613_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 7.3e-10 67.8 83 42.2
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 6.1e-09 64.7 69 50.7
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 2.3e-08 62.8 63 57.1
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 3.1e-08 62.4 42 71.4
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 3.1e-08 62.4 55 58.2
Cre12.g524200 Chlamydomonas reinhardtii HOM05D003476 ORTHO05D004057 5.2e-08 61.6 80 41.2
Hund03462 Selenicereus undatus HOM05D003476 ORTHO05D004057 4.4e-07 58.5 45 60.0
Sabra10G0148300 Salix brachista HOM05D003476 ORTHO05D004057 5.8e-07 58.2 44 70.5
PRCOL_00000631 Prasinoderma coloniale HOM05D003476 ORTHO05D004057 9.8e-07 57.4 72 41.7
Medtr8g093950 Medicago truncatula HOM05D003476 ORTHO05D004057 2.2e-06 56.2 43 65.1


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