Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.1e-56 221.1 105 100.0
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 6.3e-41 170.6 104 80.8
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 9.1e-40 166.8 94 84.0
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.7e-38 162.5 88 89.8
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 6.5e-38 160.6 86 87.2
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 2.2e-25 119.0 87 64.4
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 3.5e-23 111.7 69 78.3
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 3.5e-23 111.7 80 61.2
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.9e-23 110.9 69 78.3
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 7.7e-23 110.5 101 53.5
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 6.5e-22 107.5 86 59.3
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-21 105.5 76 59.2
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 5.5e-21 104.4 85 57.6
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 9.4e-21 103.6 93 51.6
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 9.4e-21 103.6 101 50.5
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.6e-20 101.7 84 56.0
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.7e-20 101.3 63 76.2
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 8.0e-20 100.5 90 53.3
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-19 100.1 86 55.8
FAN08G3642 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.0e-19 98.6 57 80.7
FvH4_4g15580 Fragaria vesca HOM05D003127 ORTHO05D003768 5.2e-19 97.8 62 79.0
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-19 97.4 86 54.7
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-19 97.4 87 54.0
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 2.8e-17 92.0 87 48.3
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-13 79.3 56 58.9
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.0e-11 71.6 97 39.2
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.8e-11 70.5 75 44.0
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.6e-10 68.9 75 45.3
FAN05G1588 Fragaria x ananassa HOM05D003127 ORTHO05D003768 2.6e-10 68.9 37 86.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.7e-10 67.8 75 46.7
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 7.5e-10 67.4 75 44.0
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.8e-10 67.0 97 39.2
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.8e-10 67.0 91 37.4
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.8e-10 67.0 91 38.5
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.3e-09 66.6 75 46.7
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 1.7e-09 66.2 73 42.5
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 2.2e-09 65.9 77 44.2
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-09 65.5 91 38.5
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.8e-09 65.5 85 41.2
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 4.9e-09 64.7 77 39.0
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-09 64.7 91 36.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 6.3e-09 64.3 108 35.2
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.3e-09 63.9 96 36.5
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 8.3e-09 63.9 78 44.9
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.8e-08 62.8 104 38.5
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.4e-08 62.4 79 40.5
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-08 62.0 84 36.9
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 5.4e-08 61.2 88 43.2
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.4e-08 61.2 104 37.5
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 5.4e-08 61.2 90 37.8
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 7.0e-08 60.8 77 42.9
FAN11G0973 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.2e-08 60.5 65 47.7
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-07 60.1 85 41.2
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-07 59.7 75 38.7
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-07 59.7 89 37.1
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-07 59.7 93 34.4
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-07 59.3 95 30.5
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-07 58.9 79 38.0
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 3.5e-07 58.5 79 44.3
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 3.5e-07 58.5 78 43.6
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 4.5e-07 58.2 78 42.3
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 3.8e-06 55.1 75 42.7
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 3.8e-06 55.1 31 83.9
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 3.8e-06 55.1 77 40.3
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 5.0e-06 54.7 75 36.0
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 6.6e-06 54.3 77 40.3
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 6.6e-06 54.3 65 46.2
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 8.6e-06 53.9 96 30.2


User provided reference genes

Program Settings