Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.2e-60 235.3 160 100.0
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.7e-48 194.9 161 81.4
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.1e-47 193.7 162 88.9
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 3.1e-47 192.2 165 79.4
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.3e-33 145.6 165 66.1
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 5.6e-33 144.8 177 50.8
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.6e-32 143.3 170 51.8
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.8e-32 142.5 170 51.2
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 3.6e-32 142.1 177 56.5
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 4.0e-31 138.7 175 49.1
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 6.9e-31 137.9 184 47.3
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.2e-30 137.1 178 57.3
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.2e-30 137.1 130 60.0
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.5e-30 136.7 175 52.6
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.0e-30 136.3 187 49.7
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 7.6e-30 134.4 172 47.7
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.9e-29 132.5 176 55.1
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 3.8e-29 132.1 187 50.3
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 2.4e-28 129.4 187 47.6
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 3.2e-28 129.0 176 54.5
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 3.2e-28 129.0 183 46.4
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 3.2e-28 129.0 187 46.0
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 5.4e-28 128.3 191 50.8
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 7.1e-28 127.9 184 51.6
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.5e-27 125.6 180 53.9
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.6e-27 125.2 179 45.8
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 7.9e-27 124.4 128 59.4
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 7.9e-27 124.4 132 54.5
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.0e-26 124.0 177 53.1
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.0e-26 124.0 183 43.7
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.3e-26 123.6 186 46.2
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.3e-26 123.6 194 42.3
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.8e-26 123.2 173 56.1
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.3e-26 122.9 193 44.0
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 2.3e-26 122.9 181 45.9
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.1e-25 120.6 130 54.6
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.1e-25 120.6 128 57.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.9e-25 119.8 184 44.6
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.3e-25 119.0 134 54.5
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 4.3e-25 118.6 130 55.4
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.6e-25 118.2 183 44.3
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.6e-25 118.2 130 55.4
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 5.6e-25 118.2 177 52.0
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 5.6e-25 118.2 129 56.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.3e-24 117.1 128 54.7
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.6e-24 116.7 185 43.2
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.6e-24 116.7 130 59.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.6e-24 116.7 188 41.0
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.1e-24 116.3 179 45.3
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.1e-24 116.3 183 48.6
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 2.8e-24 115.9 126 54.0
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 2.8e-24 115.9 162 60.5
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 3.7e-24 115.5 128 53.9
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 6.2e-24 114.8 192 43.2
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.1e-24 114.4 128 51.6
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.1e-24 114.4 163 55.8
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 8.1e-24 114.4 183 42.6
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.1e-23 114.0 182 44.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 4.0e-23 112.1 177 43.5
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.2e-22 110.5 193 43.0
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.2e-22 110.5 182 41.2
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.2e-22 110.5 130 53.8
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 2.0e-22 109.8 171 42.7
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 3.4e-22 109.0 132 51.5
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 1.7e-21 106.7 132 59.1
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.2e-21 106.3 142 54.9
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 2.9e-21 105.9 146 54.1
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 3.8e-21 105.5 130 55.4
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 8.4e-21 104.4 190 43.7
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.5e-20 102.8 193 46.6
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 3.2e-20 102.4 171 43.3
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 3.2e-20 102.4 174 45.4
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 2.7e-19 99.4 189 37.6
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 3.5e-19 99.0 178 49.4
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 7.9e-19 97.8 202 43.6
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.0e-18 97.4 197 39.1
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.8e-18 96.7 130 46.2
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 3.9e-18 95.5 128 46.9
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.3e-17 92.4 113 54.0
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 3.3e-17 92.4 130 45.4
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 4.3e-17 92.0 130 45.4
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 4.3e-17 92.0 130 45.4
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 4.3e-17 92.0 135 45.9
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 5.6e-17 91.7 130 44.6
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 5.6e-17 91.7 126 45.2
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 7.4e-17 91.3 130 45.4
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 7.4e-17 91.3 130 45.4
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 7.4e-17 91.3 130 45.4
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 9.6e-17 90.9 130 44.6
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 9.6e-17 90.9 130 44.6
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.7e-16 89.0 131 44.3
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.8e-15 86.7 131 43.5
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 3.1e-15 85.9 131 43.5
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 4.0e-15 85.5 130 43.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 4.0e-15 85.5 129 43.4
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 1.0e-13 80.9 185 40.0
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.9e-12 76.6 185 40.0
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.2e-11 73.9 182 36.3
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 2.1e-11 73.2 162 39.5
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 7.9e-11 71.2 191 36.6
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.5e-09 67.0 130 45.4
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.5e-09 66.2 179 37.4
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 4.8e-08 62.0 89 46.1
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 4.1e-07 58.9 128 43.8
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 3.4e-06 55.8 75 48.0


User provided reference genes

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