Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G1208 Fragaria x ananassa HOM05D016859 ORTHO05D010367 0.0e+00 1647.1 792 100.0
FAN27G2643 Fragaria x ananassa HOM05D016859 ORTHO05D010367 0.0e+00 1528.1 792 93.1
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 0.0e+00 1454.5 792 89.8
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 0.0e+00 1453.0 792 89.6
RcHm_v2.0_Chr6g0285611 Rosa chinensis HOM05D016859 ORTHO05D010367 5.9e-309 1063.9 873 64.8
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 4.1e-116 423.3 647 39.3
MD10G1171500 Malus domestica HOM05D016859 ORTHO05D010367 3.6e-80 303.9 514 37.0
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 7.0e-52 209.9 606 29.5
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 1.5e-41 175.6 445 33.3
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 2.0e-38 165.2 419 30.8
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 2.0e-38 165.2 419 30.8
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 1.1e-36 159.5 421 30.6
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 1.4e-36 159.1 453 31.1
CANSAT01G1047 Cannabis sativa HOM05D009210 ORTHO05D010367 1.6e-32 145.6 506 28.7
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 3.1e-31 141.4 583 24.2
MD10G1171600 Malus domestica HOM05D016859 ORTHO05D010367 9.0e-31 139.8 214 45.8
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 7.6e-30 136.7 844 23.3
Haze_24738 Corylus avellana HOM05D009210 ORTHO05D010367 6.6e-26 123.6 312 30.1
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 6.6e-26 123.6 452 30.3
Dinv19248 Davidia involucrata HOM05D009210 ORTHO05D010367 1.5e-25 122.5 363 26.2
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 1.6e-24 119.0 457 28.4
QL09p043642 Quercus lobata HOM05D009210 ORTHO05D010367 3.6e-24 117.9 421 28.0
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 1.7e-21 109.0 396 29.0
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 1.9e-20 105.5 558 25.4
Thecc.01G245200 Theobroma cacao HOM05D009210 ORTHO05D010367 1.9e-20 105.5 211 34.1
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 6.0e-19 100.5 390 27.2
Nn3g19852 Nelumbo nucifera HOM05D009210 ORTHO05D010367 6.0e-19 100.5 842 22.6
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 1.9e-17 95.5 387 28.7
ClCG09G009440 Citrullus lanatus HOM05D026148 ORTHO05D010367 6.2e-16 90.5 414 26.1
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 1.1e-15 89.7 451 27.1
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 6.9e-15 87.0 314 28.3
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 3.4e-14 84.7 330 28.8
TPR.G25869 Trifolium pratense HOM05D014010 ORTHO05D010367 5.8e-14 84.0 316 27.5
CSS0048272 Camellia sinensis var. sinensis HOM05D009210 ORTHO05D010367 1.7e-13 82.4 235 29.4
COL.COLO4_08165 Corchorus olitorius HOM05D009210 ORTHO05D010367 2.9e-13 81.6 437 24.9
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 6.4e-13 80.5 107 40.2
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 1.6e-11 75.9 327 26.9
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 2.7e-11 75.1 745 23.5
arahy.Tifrunner.gnm1.ann1.201IN6 Arachis hypogaea HOM05D014010 ORTHO05D010367 1.3e-10 72.8 403 24.1
Sed0006753 Sechium edule HOM05D026148 ORTHO05D010367 2.3e-10 72.0 278 27.0
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 3.9e-10 71.2 272 29.0
Atru.chr5.1921 Acer truncatum HOM05D009210 ORTHO05D010367 3.3e-09 68.2 197 32.0
CiPaw.04G192300 Carya illinoinensis HOM05D009210 ORTHO05D010367 4.3e-09 67.8 190 27.9
Aqoxy5G00051 Aquilegia oxysepala HOM05D024193 ORTHO05D010367 7.4e-09 67.0 496 23.2
Phvul.007G155700 Phaseolus vulgaris HOM05D014010 ORTHO05D010367 9.6e-09 66.6 580 21.2
MELO3C024146.2 Cucumis melo HOM05D026148 ORTHO05D010367 1.6e-08 65.9 262 26.0
A09p12760 Brassica napus HOM05D012015 ORTHO05D014750 1.1e-07 63.2 242 26.4
CsaV3_7G025420 Cucumis sativus L. HOM05D026148 ORTHO05D010367 1.4e-07 62.8 258 26.4
Atru.chr5.1922 Acer truncatum HOM05D009210 ORTHO05D010367 3.1e-07 61.6 126 32.5
AT2G20250 Arabidopsis thaliana HOM05D012015 ORTHO05D014750 5.3e-07 60.8 247 28.7
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 5.3e-07 60.8 272 25.4
PGR044G0436 Punica granatum HOM05D009210 ORTHO05D010367 6.9e-07 60.5 117 33.3
CARHR110740 Cardamine hirsuta HOM05D012015 ORTHO05D014750 1.5e-06 59.3 262 25.6
BraA09t36920Z Brassica rapa HOM05D012015 ORTHO05D014750 4.5e-06 57.8 245 26.5
Aa31LG8G17240 Aethionema arabicum HOM05D012015 ORTHO05D014750 5.8e-06 57.4 245 29.4
SGA_v2.0_scaffold3G01596 Striga asiatica HOM05D009210 ORTHO05D015998 7.6e-06 57.0 97 33.0


User provided reference genes

Program Settings