Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.8e-250 866.7 444 100.0
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.2e-239 832.8 447 97.1
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.5e-237 825.9 444 95.5
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.9e-236 821.6 447 95.3
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 9.9e-221 770.0 450 90.2
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.5e-163 580.1 443 70.9
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.5e-163 580.1 383 78.1
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 6.1e-162 574.7 461 67.9
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.0e-161 573.9 435 69.4
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.3e-161 572.8 424 71.9
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.0e-161 572.4 458 68.3
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 8.8e-161 570.9 384 76.6
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.1e-158 562.0 437 69.6
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 5.3e-158 561.6 446 69.3
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.2e-157 560.5 426 70.0
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.5e-157 558.5 420 70.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.8e-156 555.4 420 70.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 8.5e-156 554.3 385 74.3
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.2e-154 550.4 378 74.1
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 1.6e-154 550.1 389 74.6
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.7e-154 549.3 449 66.1
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.7e-154 549.3 456 67.5
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.7e-154 548.5 424 69.8
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 4.7e-154 548.5 412 70.1
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.4e-153 547.0 412 72.1
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.8e-153 546.6 420 69.3
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.2e-153 545.0 440 68.4
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.2e-152 543.9 437 67.7
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.6e-152 542.7 432 68.1
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.4e-152 542.0 419 68.7
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 4.4e-152 542.0 424 68.6
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.7e-151 540.0 418 68.9
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.2e-151 539.7 418 68.2
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.8e-151 538.5 418 68.7
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.1e-150 537.3 365 76.7
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.4e-150 536.2 438 68.0
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 4.1e-150 535.4 425 67.3
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.4e-150 535.0 378 73.8
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 7.0e-150 534.6 385 71.9
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.0e-149 533.1 418 67.9
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 3.5e-149 532.3 443 65.7
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 7.7e-149 531.2 423 68.3
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.7e-149 531.2 412 68.7
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.7e-148 530.0 376 73.9
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-148 530.0 409 68.7
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-148 530.0 409 68.7
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.7e-148 530.0 426 66.7
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.7e-148 530.0 421 67.2
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.3e-148 529.6 388 70.9
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.9e-148 529.3 406 69.2
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 6.6e-148 528.1 418 67.9
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.5e-147 526.9 390 71.3
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.9e-147 526.6 387 71.3
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.5e-147 526.2 385 70.6
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 3.6e-146 522.3 390 70.8
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.1e-146 521.5 371 73.3
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-145 520.0 422 66.1
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.8e-145 520.0 471 61.6
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.2e-145 518.5 419 66.3
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 6.8e-145 518.1 422 66.4
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.6e-144 516.2 417 67.1
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 4.4e-144 515.4 387 69.3
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.4e-144 515.4 376 72.9
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.2e-143 513.1 412 68.7
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.2e-143 513.1 432 65.7
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.8e-142 510.0 386 70.7
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.4e-142 509.6 333 77.8
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 3.1e-142 509.2 439 62.2
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 7.0e-142 508.1 406 66.3
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 3.5e-141 505.8 414 67.1
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 7.8e-141 504.6 476 59.5
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.7e-140 503.4 333 76.9
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.1e-139 500.7 412 67.5
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.5e-139 499.6 442 63.6
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 3.3e-139 499.2 383 68.4
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 4.3e-139 498.8 431 65.0
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 7.3e-139 498.0 383 68.1
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 5.2e-129 465.3 420 61.0
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.8e-128 461.1 427 59.3
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.6e-125 453.8 421 59.1
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.7e-124 450.3 399 61.7
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 2.3e-124 449.9 376 62.5
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 2.3e-124 449.9 375 63.7
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 5.1e-124 448.7 423 58.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 3.6e-122 442.6 424 58.3
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.8e-121 440.3 288 84.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 5.4e-118 428.7 376 62.0
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 2.5e-115 419.9 453 55.0
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.2e-114 417.5 369 62.6
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.1e-113 414.5 412 58.7
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.8e-113 413.7 452 54.9
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.0e-113 412.5 414 58.5
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 6.8e-113 411.8 463 53.6
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-112 410.6 439 56.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-111 407.5 440 56.4
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.3e-111 407.5 440 56.4
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 6.4e-111 405.2 338 64.2
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.9e-110 403.7 338 64.2
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 7.8e-109 398.3 427 55.5
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 9.3e-102 374.8 417 54.2
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 9.3e-102 374.8 417 54.2
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.3e-100 370.9 419 53.2
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.0e-100 369.8 414 53.6
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.0e-100 369.8 414 53.6
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 6.6e-100 368.6 443 51.7
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 7.4e-91 338.6 375 54.1
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.7e-90 336.3 234 72.6
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.9e-78 297.4 217 68.7
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 5.5e-70 269.2 139 97.8
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.0e-68 265.0 366 41.5
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 5.1e-60 236.1 158 77.2
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.6e-53 213.4 406 34.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 5.7e-51 206.1 465 34.4
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-44 184.5 152 64.5
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 3.7e-42 176.8 125 72.8
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.1e-41 173.7 110 78.2
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 9.1e-41 172.2 391 36.1
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 4.0e-36 156.8 154 53.2
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.6e-35 154.1 415 34.0
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.6e-35 154.1 126 68.3
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 4.4e-35 153.3 236 44.1
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.0e-31 142.1 127 60.6
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.0e-27 127.9 199 39.7
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.9e-26 124.0 317 30.6
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 4.1e-25 120.2 81 77.8
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-22 112.1 78 71.8
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.5e-11 75.1 210 31.0
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 3.4e-11 73.9 235 27.2
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.5e-08 63.9 270 26.3
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.7e-07 61.6 307 25.4
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.7e-07 61.6 306 24.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 6.6e-07 59.7 400 23.5
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 8.6e-07 59.3 64 54.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 8.6e-07 59.3 398 23.1
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 8.6e-07 59.3 273 25.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.5e-06 58.5 281 24.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.9e-06 58.2 287 24.7
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.9e-06 58.2 269 23.8
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 2.5e-06 57.8 283 25.8
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 4.3e-06 57.0 269 23.4
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.3e-06 57.0 277 24.5
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 7.3e-06 56.2 416 24.3


User provided reference genes

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