Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0861 Fragaria x ananassa HOM05D000457 ORTHO05D000031 9.7e-102 373.6 209 100.0
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 1.1e-39 167.5 351 40.7
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 3.3e-33 146.0 126 69.0
FvH4_1g29751 Fragaria vesca HOM05D044676 ORTHO05D000031 9.6e-33 144.4 184 53.8
FvH4_1g21452 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-29 131.7 140 59.3
FvH4_3g19351 Fragaria vesca HOM05D000030 ORTHO05D000031 1.8e-23 113.6 68 82.4
RcHm_v2.0_Chr1g0351191 Rosa chinensis HOM05D000030 ORTHO05D000031 1.3e-18 97.4 120 55.0
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 4.8e-16 89.0 126 42.1
RcHm_v2.0_Chr2g0142391 Rosa chinensis HOM05D000030 ORTHO05D000031 2.4e-15 86.7 130 42.3
RcHm_v2.0_Chr3g0496341 Rosa chinensis HOM05D000030 ORTHO05D000031 6.9e-15 85.1 127 42.5
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 2.6e-14 83.2 128 41.4
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 3.8e-13 79.3 136 39.7
FvH4_4g06882 Fragaria vesca HOM05D000030 ORTHO05D000031 3.8e-13 79.3 93 44.1
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 5.0e-13 79.0 138 40.6
FAN18G0649 Fragaria x ananassa HOM05D000457 ORTHO05D000560 6.5e-13 78.6 75 70.7
RcHm_v2.0_Chr4g0396801 Rosa chinensis HOM05D000030 ORTHO05D000031 1.1e-12 77.8 129 41.1
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 1.2e-11 74.3 173 37.0
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 1.8e-10 70.5 87 43.7
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 3.9e-10 69.3 129 35.7
FvH4_2g05171 Fragaria vesca HOM05D004520 ORTHO05D000031 1.1e-09 67.8 83 42.2
RcHm_v2.0_Chr7g0235371 Rosa chinensis HOM05D000030 ORTHO05D000009 1.1e-09 67.8 70 48.6
FvH4_4g16143 Fragaria vesca HOM05D000030 ORTHO05D000031 1.5e-09 67.4 86 41.9
MD05G1210500 Malus domestica HOM05D000030 ORTHO05D000031 1.9e-09 67.0 132 35.6
RcHm_v2.0_Chr2g0141501 Rosa chinensis HOM05D008722 ORTHO05D000009 1.8e-07 60.5 129 38.0
FvH4_2g00811 Fragaria vesca HOM05D000030 ORTHO05D000031 5.3e-07 58.9 62 64.5
Lj2C454T1 Lonicera japonica HOM05D008722 ORTHO05D000031 5.3e-07 58.9 79 35.4
MELO3C035350.2 Cucumis melo HOM05D000030 ORTHO05D000031 1.2e-06 57.8 99 39.4
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-06 57.8 75 41.3
Hma1.2p1_0034F.1_g021450 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.5e-06 57.4 83 38.6
Atru.chr1.2072 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-06 56.6 94 40.4
Atru.chr11.1061 Acer truncatum HOM05D000044 ORTHO05D000009 2.6e-06 56.6 90 38.9
Atru.chr4.1709 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-06 56.6 90 38.9
MELO3C032211.2 Cucumis melo HOM05D000030 ORTHO05D000009 3.4e-06 56.2 97 36.1
Rhsim10G0137500 Rhododendron simsii HOM05D000030 ORTHO05D000031 3.4e-06 56.2 60 41.7
Atru.chr1.2973 Acer truncatum HOM05D000030 ORTHO05D000009 4.5e-06 55.8 78 41.0
FvH4_1g22411 Fragaria vesca HOM05D008722 ORTHO05D012680 4.5e-06 55.8 67 40.3
RcHm_v2.0_Chr5g0016281 Rosa chinensis HOM05D000030 ORTHO05D000009 4.5e-06 55.8 122 33.6
RcHm_v2.0_Chr7g0242101 Rosa chinensis HOM05D000030 ORTHO05D000031 4.5e-06 55.8 120 32.5
Atru.chr3.4252 Acer truncatum HOM05D000030 ORTHO05D000031 5.9e-06 55.5 90 38.9
FvH4_6g16042 Fragaria vesca HOM05D008722 ORTHO05D012680 7.7e-06 55.1 88 36.4
FvH4_6g40821 Fragaria vesca HOM05D008722 ORTHO05D012680 7.7e-06 55.1 67 40.3
Atru.ctg1438.3 Acer truncatum HOM05D000030 ORTHO05D000009 1.0e-05 54.7 90 37.8
Hma1.2p1_0314F.1_g121830 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 1.0e-05 54.7 75 41.3


User provided reference genes

Program Settings