Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-170 600.9 284 100.0
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-110 402.1 307 71.0
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 6.9e-42 175.3 97 88.7
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 2.5e-39 166.8 297 41.4
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-37 160.2 314 36.3
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-37 158.3 305 39.7
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 5.3e-34 149.1 306 38.2
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.3e-34 149.1 304 37.2
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 9.0e-34 148.3 315 36.5
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.0e-34 148.3 335 35.8
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.9e-33 145.6 304 36.5
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.9e-33 145.6 329 35.3
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.6e-33 145.2 309 37.2
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-32 144.1 314 35.4
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 3.8e-32 142.9 296 36.1
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 3.8e-32 142.9 320 35.3
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 8.5e-32 141.7 308 34.7
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-31 141.0 336 35.7
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-31 141.0 336 35.7
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-31 140.6 272 36.8
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 2.5e-31 140.2 356 31.7
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-31 139.8 320 34.4
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-31 139.8 290 36.9
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-31 139.4 316 34.8
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-31 139.4 329 33.7
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.3e-31 138.3 324 34.3
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-30 137.9 337 33.8
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-30 137.9 260 38.5
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-30 135.2 305 36.4
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 3.0e-29 133.3 326 34.4
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 6.7e-29 132.1 324 34.6
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 1.5e-28 131.0 339 33.6
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-28 128.6 267 38.6
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-28 128.3 290 36.9
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 4.8e-27 125.9 268 35.8
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-27 125.6 263 36.9
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-27 125.6 263 36.9
FAN14G4512 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-26 123.6 243 36.2
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 9.0e-26 121.7 282 34.4
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 2.6e-25 120.2 321 33.0
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.7e-25 118.6 313 30.4
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 3.8e-24 116.3 272 33.8
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-23 114.8 318 33.6
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-23 114.0 298 30.9
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.2e-23 113.2 298 34.9
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-21 106.3 275 32.4
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-21 105.9 296 32.4
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 5.1e-21 105.9 295 33.2
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 6.7e-21 105.5 316 32.9
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 6.7e-21 105.5 288 31.9
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 1.7e-19 100.9 247 34.0
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.8e-19 99.4 287 31.0
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-17 94.0 288 30.2
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-17 94.0 286 29.0
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-17 93.6 288 30.2
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.9e-17 92.4 138 45.7
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.7e-17 92.0 146 41.1
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-16 90.9 269 30.5
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 2.2e-16 90.5 269 30.5
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-16 90.1 201 34.3
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.0e-16 89.4 114 42.1
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.5e-16 88.6 176 36.9
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-15 87.0 322 27.6
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 4.2e-15 86.3 116 39.7
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 4.2e-15 86.3 251 34.7
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-14 83.6 322 28.3
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 2.7e-14 83.6 324 29.6
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 2.7e-14 83.6 324 29.6
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 2.7e-14 83.6 324 29.6
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 3.6e-14 83.2 265 30.6
FAN05G1009 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-14 83.2 216 31.0
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 4.7e-14 82.8 203 37.4
FAN14G0026 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-14 82.0 114 41.2
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-13 80.9 197 31.0
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.9e-13 79.7 324 29.0
Lj2P493T31 Lonicera japonica HOM05D000151 ORTHO05D000074 5.2e-13 79.3 307 26.1
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 6.7e-13 79.0 252 28.6
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.7e-13 79.0 286 26.9
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-12 78.2 106 48.1
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-12 77.8 327 27.5
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 3.3e-12 76.6 105 48.6
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 7.4e-12 75.5 324 28.7
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-11 73.9 239 29.3
FAN05G3215 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-11 73.6 280 29.3
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-11 73.2 299 26.1
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-11 72.4 244 29.9
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-11 72.0 270 28.1
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-10 71.6 272 26.8
RcHm_v2.0_Chr6g0254481 Rosa chinensis HOM05D000151 ORTHO05D000074 2.4e-10 70.5 295 27.5
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.1e-10 69.7 96 45.8
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 5.3e-10 69.3 298 28.2
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.3e-10 69.3 297 25.3
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-10 68.9 76 51.3
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 9.1e-10 68.6 312 23.7
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-09 67.8 155 36.1
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.0e-09 67.4 268 26.9
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 2.0e-09 67.4 304 25.3
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 3.5e-09 66.6 105 42.9
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.5e-09 66.2 317 26.8
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-09 66.2 269 25.3
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 4.5e-09 66.2 149 36.9
TWI63G1822 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.0e-08 65.1 114 35.1
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.2e-08 63.9 293 25.9
FAN11G4008 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.2e-08 63.9 304 25.0
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 2.2e-08 63.9 309 21.4
Rhsim09G0016300 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.2e-08 63.9 324 25.9
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-08 63.5 131 41.2
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 3.8e-08 63.2 342 25.7
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-08 63.2 231 29.0
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 1.5e-07 61.2 286 24.5
FAN25G0324 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-07 60.8 111 42.3
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.5e-07 60.5 302 24.2
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.5e-07 60.5 293 25.6
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 3.2e-07 60.1 348 22.4
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-07 59.7 251 28.3
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 5.5e-07 59.3 223 26.0
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.5e-07 59.3 300 23.3
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 7.2e-07 58.9 118 43.2
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-06 58.2 114 35.1
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 1.2e-06 58.2 305 22.6
Lj2C486T14 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-06 57.8 255 25.9
TAR636G1638 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-06 57.4 307 25.1
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-06 57.0 262 26.0
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-06 56.6 109 33.0
HanXRQChr05g0145731 Helianthus annuus HOM05D000151 ORTHO05D000074 3.6e-06 56.6 224 25.9
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 4.7e-06 56.2 309 24.6
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 4.7e-06 56.2 257 26.8
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.1e-06 55.8 114 38.6
Rhsim12G0122800 Rhododendron simsii HOM05D000151 ORTHO05D000074 6.1e-06 55.8 267 25.8
Ca_03009_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 8.0e-06 55.5 231 28.1


User provided reference genes

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