Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.5e-56 223.4 193 100.0
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 7.5e-48 194.5 193 86.0
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.8e-47 192.6 193 90.2
RcHm_v2.0_Chr6g0274981 Rosa chinensis HOM05D002879 ORTHO05D002930 2.2e-31 139.8 193 78.2
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 8.9e-17 91.3 198 63.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 5.8e-16 88.6 192 44.8
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 4.3e-11 72.4 145 44.1
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 7.3e-11 71.6 95 65.3
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 9.5e-11 71.2 93 78.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.6e-10 70.5 91 57.1
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.8e-10 69.7 92 48.9
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.6e-10 69.3 95 56.8
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.2e-10 68.6 95 56.8
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 8.1e-10 68.2 194 50.5
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.1e-10 68.2 92 71.7
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.8e-09 67.0 196 40.3
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-09 66.2 204 51.0
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 4.0e-09 65.9 97 79.4
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 4.0e-09 65.9 97 80.4
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 1.2e-08 64.3 95 75.8
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.5e-08 63.9 95 62.1
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.5e-08 63.9 95 62.1
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.0e-08 63.5 95 64.2
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.6e-08 63.2 94 67.0
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 3.4e-08 62.8 94 47.9
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 5.8e-08 62.0 95 50.5
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 7.6e-08 61.6 95 52.6
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.9e-08 61.2 94 77.7
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.9e-08 61.2 94 77.7
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 2.9e-07 59.7 92 76.1
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.9e-07 59.7 193 42.0
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.7e-07 59.3 194 45.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 4.9e-07 58.9 219 50.7
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 4.9e-07 58.9 94 78.7
Cfa018311 Carpinus fangiana HOM05D066527 ORTHO05D002930 6.4e-07 58.5 154 42.2
COL.COLO4_29858 Corchorus olitorius HOM05D002879 ORTHO05D002930 6.4e-07 58.5 92 81.5
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 6.4e-07 58.5 95 47.4
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 6.4e-07 58.5 68 75.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-07 58.2 96 54.2
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 8.4e-07 58.2 194 47.4
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-06 57.4 48 75.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.9e-06 57.0 83 67.5
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-06 57.0 91 79.1
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 2.4e-06 56.6 91 71.4
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 3.2e-06 56.2 157 54.1
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.2e-06 56.2 91 63.7
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.2e-06 56.2 91 63.7
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 4.1e-06 55.8 87 55.2
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 5.4e-06 55.5 49 83.7
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 5.4e-06 55.5 87 72.4
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 5.4e-06 55.5 68 82.4
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 7.1e-06 55.1 91 78.0
CsaV3_6G002580 Cucumis sativus L. HOM05D002879 ORTHO05D002930 7.1e-06 55.1 92 79.3
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 7.1e-06 55.1 96 72.9


User provided reference genes

Program Settings