Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G0380 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.1e-90 335.9 191 100.0
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 1.2e-82 310.1 191 90.6
FAN20G0770 Fragaria x ananassa HOM05D030376 ORTHO05D005146 5.2e-78 294.7 180 92.8
FAN24G2816 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.9e-60 235.7 152 88.2
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 3.3e-16 89.4 175 42.3
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 4.5e-13 79.0 178 36.5
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.2e-12 76.6 176 35.8
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 2.2e-12 76.6 177 37.3
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.8e-12 75.9 171 35.1
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.8e-12 75.9 171 35.1
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 6.5e-12 75.1 193 34.7
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 8.5e-12 74.7 180 36.1
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.2e-11 72.8 171 34.5
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 1.6e-10 70.5 184 35.3
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 3.6e-10 69.3 180 35.0
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 3.6e-10 69.3 179 34.6
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 8.0e-10 68.2 169 34.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 8.0e-10 68.2 169 34.3
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.3e-09 66.6 180 37.2
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 2.3e-09 66.6 191 33.0
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.0e-09 66.2 117 39.3
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.0e-09 65.9 167 35.3
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 6.8e-09 65.1 175 32.0
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.2e-08 64.3 168 32.7
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.5e-08 63.9 170 30.6
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.4e-08 62.4 166 32.5
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.7e-08 62.0 165 32.7
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 9.8e-08 61.2 171 32.2
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 1.3e-07 60.8 173 30.6
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 4.8e-07 58.9 171 31.6
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 4.8e-07 58.9 167 31.1
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 4.8e-07 58.9 171 33.9
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 4.8e-07 58.9 170 31.2
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 6.3e-07 58.5 166 30.1
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.3e-07 58.5 173 31.8
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 8.3e-07 58.2 177 31.6
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.3e-07 58.2 174 32.2
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 8.3e-07 58.2 178 29.2
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-06 57.8 164 37.2
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-06 57.8 175 33.1
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.1e-06 57.8 175 33.1
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.4e-06 57.4 159 37.7
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.4e-06 57.4 165 33.3
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 1.8e-06 57.0 171 30.4
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.4e-06 56.6 158 32.9
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 2.4e-06 56.6 188 30.9
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 3.1e-06 56.2 176 34.1
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.1e-06 56.2 175 30.9
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 5.4e-06 55.5 163 31.3
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 5.4e-06 55.5 188 30.3
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 5.4e-06 55.5 191 27.2
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 5.4e-06 55.5 170 30.6
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 5.4e-06 55.5 173 28.9
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 5.4e-06 55.5 185 33.5
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 7.0e-06 55.1 170 30.6
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 7.0e-06 55.1 184 29.9
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.0e-06 55.1 188 31.4
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 9.1e-06 54.7 187 29.9
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 9.1e-06 54.7 172 34.3


User provided reference genes

Program Settings