Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 2.1e-146 522.3 256 100.0
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.1e-146 522.3 256 100.0
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.1e-146 522.3 256 100.0
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.3e-145 518.8 256 99.6
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 8.4e-140 500.4 256 94.5
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.1e-134 483.4 256 91.0
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 2.4e-134 482.3 256 91.0
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 2.7e-130 468.8 253 88.9
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 2.7e-130 468.8 255 88.6
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 2.7e-130 468.8 255 88.6
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 3.0e-129 465.3 256 87.5
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 5.1e-129 464.5 257 87.5
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.1e-128 463.4 256 87.1
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 7.4e-128 460.7 257 86.8
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 2.2e-127 459.1 257 86.8
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 3.7e-127 458.4 257 87.2
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 6.3e-127 457.6 256 86.3
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 1.1e-126 456.8 257 87.5
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.8e-126 456.1 257 85.6
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.1e-126 454.9 253 86.2
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 5.3e-126 454.5 256 85.2
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 9.1e-126 453.8 257 86.0
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 9.1e-126 453.8 257 86.0
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 86.4
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 86.0
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 2.6e-125 452.2 257 85.6
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 5.9e-125 451.1 255 85.5
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 7.7e-125 450.7 257 84.0
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 2.9e-124 448.7 257 84.8
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 3.8e-124 448.4 257 84.8
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 3.8e-124 448.4 255 84.3
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 6.5e-124 447.6 257 84.0
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.4
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 85.2
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 83.7
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 83.7
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 83.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 7.2e-123 444.1 255 83.5
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 83.7
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 83.7
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 82.9
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 2.7e-122 442.2 256 83.6
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 82.5
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 82.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 83.7
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 83.7
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 2.3e-121 439.1 257 82.9
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 3.9e-121 438.3 257 82.9
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 5.1e-121 438.0 264 81.1
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 8.8e-121 437.2 254 83.1
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 5.7e-120 434.5 256 81.6
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 5.7e-120 434.5 256 81.6
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 81.3
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 84.0
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 84.0
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 84.0
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.8e-119 432.2 257 81.7
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 8.2e-119 430.6 257 83.3
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 81.7
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 4.1e-118 428.3 257 82.5
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 9.1e-118 427.2 257 81.3
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.2e-117 426.8 257 81.3
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.2e-117 426.8 257 81.3
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.0e-117 426.0 256 83.2
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 7.7e-117 424.1 257 80.9
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.0e-116 423.7 271 77.5
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.3e-116 423.3 302 71.5
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 1.3e-116 423.3 263 79.5
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 2.2e-116 422.5 257 80.5
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.2e-116 422.5 271 77.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 5.0e-116 421.4 257 80.5
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.1e-115 420.2 249 82.3
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.4e-115 419.9 257 77.4
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 1.4e-115 419.9 249 82.3
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 3.2e-115 418.7 257 79.8
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 5.5e-115 417.9 257 78.6
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.4
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 80.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 2.7e-114 415.6 258 77.9
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.0e-113 413.7 257 78.6
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.3e-111 406.8 257 78.2
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.2e-111 406.0 230 85.2
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 4.1e-110 401.7 255 75.7
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.2e-109 400.2 253 77.1
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.9e-108 395.6 257 74.3
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 7.2e-107 391.0 250 76.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 3.6e-106 388.7 257 73.9
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 8.0e-106 387.5 249 75.5
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.2e-103 379.4 281 71.2
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.1e-102 377.1 214 83.2
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.0e-100 370.5 231 76.6
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 5.0e-100 368.2 222 79.7
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.5e-99 366.7 257 73.5
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 4.2e-99 365.2 257 73.5
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 2.3e-97 359.4 214 80.4
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 9.1e-94 347.4 249 68.7
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 7.7e-93 344.4 247 68.8
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 1.8e-89 333.2 251 65.7
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 6.8e-89 331.3 198 81.3
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.5e-88 330.1 250 64.0
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.0e-84 317.4 251 63.3
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 6.6e-84 314.7 203 73.4
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 1.1e-78 297.4 171 84.2
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 6.6e-68 261.5 170 73.5
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 4.7e-66 255.4 153 81.0
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 4.4e-64 248.8 142 85.2
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 9.9e-64 247.7 254 51.2
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.6e-61 240.4 132 85.6
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 6.0e-61 238.4 198 64.6
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.7e-60 236.9 248 48.8
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.5e-56 223.8 130 82.3
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.5e-51 206.5 267 41.9
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.6e-50 202.6 112 84.8
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 8.1e-50 201.4 114 84.2
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 5.3e-49 198.7 116 75.9
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.9e-47 193.0 105 87.6
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 4.9e-47 192.2 105 84.8
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 3.2e-46 189.5 156 60.9
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 3.3e-43 179.5 105 82.9
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.8e-42 176.4 257 44.4
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.4e-41 174.1 104 81.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.4e-41 173.3 105 80.0
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.4e-33 147.5 116 66.4
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 3.8e-31 139.4 91 68.1
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 8.2e-26 121.7 79 77.2
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.1e-25 121.3 102 58.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.9e-22 110.5 96 60.4
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 2.5e-22 110.2 59 86.4
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 8.5e-15 85.1 55 70.9
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.0e-12 78.2 71 59.2
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 3.4e-08 63.2 40 77.5


User provided reference genes

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