Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.3e-202 708.8 381 100.0
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.3e-152 543.5 319 90.9
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 3.2e-151 538.9 320 90.3
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 8.7e-149 530.8 317 89.3
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.1e-146 523.9 312 89.4
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 1.3e-128 463.8 277 90.6
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 3.3e-100 369.4 317 68.8
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 2.7e-57 226.9 319 46.7
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 9.5e-55 218.4 259 50.6
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 5.2e-53 212.6 300 46.7
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 2.3e-40 170.6 146 62.3
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 1.9e-31 141.0 151 51.0
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 3.3e-31 140.2 141 52.5
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 5.6e-31 139.4 122 57.4
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 7.3e-31 139.0 122 57.4
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 1.8e-29 134.4 149 53.7
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 6.9e-29 132.5 148 48.0
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 2.0e-28 131.0 131 54.2
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 3.4e-28 130.2 165 50.3
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 7.6e-28 129.0 141 49.6
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 9.9e-28 128.6 133 50.4
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 9.9e-28 128.6 132 52.3
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 2.2e-27 127.5 136 50.7
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 2.9e-27 127.1 166 47.6
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 2.9e-27 127.1 150 48.7
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 2.9e-27 127.1 121 56.2
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 3.8e-27 126.7 119 51.3
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 8.4e-27 125.6 135 50.4
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 1.1e-26 125.2 148 47.3
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 1.9e-26 124.4 149 47.0
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 1.9e-26 124.4 166 46.4
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 4.2e-26 123.2 150 48.0
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 7.1e-26 122.5 167 44.3
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 9.3e-26 122.1 139 48.2
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 1.2e-25 121.7 133 50.4
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 2.1e-25 120.9 147 46.3
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 2.7e-25 120.6 127 51.2
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 3.5e-25 120.2 143 46.9
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 7.9e-25 119.0 133 50.4
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 1.3e-24 118.2 122 50.8
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 3.0e-24 117.1 124 47.6
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 5.1e-24 116.3 149 44.3
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 5.1e-24 116.3 137 48.2
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 1.1e-23 115.2 154 44.8
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 1.1e-23 115.2 114 50.0
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 1.5e-23 114.8 150 44.7
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 2.5e-23 114.0 119 52.9
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 4.3e-23 113.2 168 39.3
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 4.3e-23 113.2 132 48.5
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.3e-22 111.7 141 43.3
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 3.7e-22 110.2 137 48.2
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 6.2e-22 109.4 131 44.3
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 6.2e-22 109.4 122 45.9
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 1.1e-21 108.6 113 47.8
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 4.0e-21 106.7 113 47.8
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 5.3e-21 106.3 118 44.9
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 2.6e-20 104.0 155 40.6
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 1.3e-19 101.7 142 45.1
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 1.7e-19 101.3 139 41.0
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.2e-19 100.9 132 40.2
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 8.4e-19 99.0 166 38.0
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.1e-18 98.6 131 43.5
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 1.1e-18 98.6 150 39.3
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 1.4e-18 98.2 157 38.9
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 1.9e-18 97.8 122 45.1
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 3.2e-18 97.1 119 40.3
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 5.5e-18 96.3 166 36.7
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 7.1e-18 95.9 113 46.0
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 9.3e-18 95.5 118 44.1
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 1.2e-17 95.1 142 38.0
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 2.7e-17 94.0 121 41.3
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 7.9e-17 92.4 154 36.4
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 1.0e-16 92.0 152 39.5
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 1.3e-16 91.7 141 39.7
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 2.3e-16 90.9 141 39.7
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 6.7e-16 89.4 82 51.2
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 3.1e-13 80.5 122 36.9
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 2.0e-12 77.8 122 36.1
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 3.2e-10 70.5 117 34.2
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 5.5e-10 69.7 127 34.6
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 3.5e-09 67.0 95 40.0
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 4.6e-09 66.6 161 32.3
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 7.9e-09 65.9 121 32.2
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 4.3e-07 60.1 109 36.7


User provided reference genes

Program Settings