Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 7.2e-83 310.5 149 100.0
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.6e-34 149.8 84 86.9
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 2.8e-34 149.1 84 85.7
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 6.2e-34 147.9 84 85.7
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 4.0e-33 145.2 84 84.5
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.2e-32 143.7 84 85.7
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 1.2e-32 143.7 84 81.0
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 8.1e-26 120.9 85 71.8
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 1.4e-25 120.2 126 53.2
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 1.4e-25 120.2 81 72.8
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 2.4e-25 119.4 126 52.4
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 2.4e-25 119.4 137 53.3
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 3.1e-25 119.0 83 71.1
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 9.0e-25 117.5 83 69.9
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.2e-24 117.1 83 69.9
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 1.2e-24 117.1 83 69.9
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 1.2e-24 117.1 86 69.8
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.2e-24 117.1 80 71.2
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.5e-24 116.7 122 56.6
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 1.5e-24 116.7 83 69.9
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.5e-24 116.7 83 68.7
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 2.0e-24 116.3 80 70.0
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 2.6e-24 115.9 83 69.9
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 2.6e-24 115.9 83 69.9
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 3.4e-24 115.5 83 68.7
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 4.4e-24 115.2 86 68.6
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 4.4e-24 115.2 86 68.6
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 5.8e-24 114.8 86 67.4
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 5.8e-24 114.8 86 66.3
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 7.6e-24 114.4 80 68.8
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 7.6e-24 114.4 116 52.6
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 9.9e-24 114.0 86 67.4
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 1.7e-23 113.2 83 68.7
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 2.2e-23 112.8 83 66.3
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 2.2e-23 112.8 83 66.3
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.2e-23 112.8 81 67.9
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 2.9e-23 112.5 81 67.9
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 2.9e-23 112.5 83 68.7
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 2.9e-23 112.5 85 64.7
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 2.9e-23 112.5 116 54.3
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 4.9e-23 111.7 81 65.4
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 4.9e-23 111.7 80 68.8
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 4.9e-23 111.7 83 67.5
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 6.4e-23 111.3 85 65.9
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 6.4e-23 111.3 138 47.8
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 6.4e-23 111.3 116 53.4
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 8.4e-23 110.9 82 64.6
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 8.4e-23 110.9 81 65.4
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 8.4e-23 110.9 83 67.5
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 8.4e-23 110.9 107 55.1
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 8.4e-23 110.9 109 55.0
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 1.4e-22 110.2 81 64.2
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 1.9e-22 109.8 81 65.4
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 1.9e-22 109.8 81 65.4
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 1.9e-22 109.8 85 62.4
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 1.9e-22 109.8 85 62.4
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.9e-22 109.8 81 65.4
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.9e-22 109.8 83 62.7
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 2.4e-22 109.4 107 57.0
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 2.4e-22 109.4 105 59.0
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 2.4e-22 109.4 81 65.4
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 4.2e-22 108.6 85 61.2
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 7.1e-22 107.8 107 58.9
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 9.3e-22 107.5 105 56.2
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 9.3e-22 107.5 85 63.5
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 9.3e-22 107.5 68 77.9
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 9.3e-22 107.5 81 66.7
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 1.2e-21 107.1 81 65.4
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 1.2e-21 107.1 85 64.7
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 1.6e-21 106.7 81 63.0
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 1.6e-21 106.7 81 63.0
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.6e-21 106.7 83 65.1
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 2.7e-21 105.9 84 65.5
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 2.7e-21 105.9 81 65.4
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 3.5e-21 105.5 139 44.6
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 4.6e-21 105.1 81 65.4
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 6.0e-21 104.8 86 60.5
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 6.0e-21 104.8 86 60.5
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 7.8e-21 104.4 85 64.7
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 7.8e-21 104.4 83 62.7
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 1.3e-20 103.6 79 64.6
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 3.0e-20 102.4 105 55.2
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 5.1e-20 101.7 86 61.6
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 5.1e-20 101.7 86 61.6
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 5.1e-20 101.7 86 61.6
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 5.1e-20 101.7 86 61.6
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 6.6e-20 101.3 82 63.4
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 6.6e-20 101.3 82 63.4
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 1.1e-19 100.5 116 49.1
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.1e-19 100.5 82 62.2
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.1e-19 100.5 81 64.2
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.1e-19 100.5 81 64.2
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 1.5e-19 100.1 81 61.7
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 1.9e-19 99.8 98 56.1
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 1.9e-19 99.8 133 49.6
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 3.3e-19 99.0 83 59.0
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 3.3e-19 99.0 98 56.1
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 9.6e-19 97.4 81 63.0
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 1.3e-18 97.1 83 61.4
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 4.8e-18 95.1 133 48.1
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.8e-17 93.2 106 49.1
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 2.4e-17 92.8 85 55.3
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 3.1e-17 92.4 103 51.5
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 6.9e-17 91.3 81 60.5
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.7e-15 86.7 109 46.8
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 1.7e-15 86.7 82 57.3
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 2.9e-15 85.9 69 59.4
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 6.4e-15 84.7 98 46.9
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 6.4e-15 84.7 81 54.3
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 8.4e-15 84.3 82 54.9
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 1.1e-14 84.0 82 53.7
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 4.2e-14 82.0 97 47.4
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 7.1e-14 81.3 82 52.4
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 7.1e-14 81.3 82 52.4
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 9.3e-14 80.9 55 69.1
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 1.3e-12 77.0 80 50.0
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 3.9e-12 75.5 80 48.8
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 5.3e-09 65.1 80 43.8
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 2.6e-08 62.8 62 54.8
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 6.4e-07 58.2 48 54.2


User provided reference genes

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