Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.6e-181 637.5 324 100.0
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.4e-179 632.9 324 99.4
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.4e-176 622.9 324 98.1
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-176 622.5 324 98.1
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 8.1e-164 580.5 324 92.0
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-157 559.3 296 96.6
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 3.0e-134 482.3 329 77.5
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 4.4e-117 425.2 329 69.3
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.7e-116 423.3 320 70.9
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.4e-115 420.2 328 68.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.1e-115 419.1 334 69.2
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 4.1e-115 418.7 320 69.4
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 5.9e-114 414.8 328 69.2
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.2e-113 412.9 328 69.2
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 2.9e-113 412.5 323 68.4
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 6.5e-113 411.4 323 69.0
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.5e-112 410.2 323 68.1
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.9e-112 409.8 323 67.5
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 9.4e-112 407.5 313 68.7
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 9.4e-112 407.5 316 67.7
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.2e-111 407.1 314 68.5
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.2e-111 407.1 326 69.6
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.2e-111 407.1 326 69.6
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 2.1e-111 406.4 324 66.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 2.1e-111 406.4 323 68.1
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 2.1e-111 406.4 325 66.8
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 2.1e-111 406.4 329 68.7
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.7e-111 405.2 255 78.8
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-110 403.7 323 67.2
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.3e-110 402.9 324 66.0
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 4.0e-110 402.1 328 67.1
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.0e-109 399.8 335 65.1
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 3.4e-109 399.1 319 66.8
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 4.4e-109 398.7 321 65.4
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 7.5e-109 397.9 326 66.3
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 2.8e-108 396.0 318 67.0
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 3.7e-108 395.6 330 65.2
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 6.3e-108 394.8 272 77.2
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 8.3e-108 394.4 323 65.0
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 1.4e-107 393.7 314 66.2
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 4.1e-107 392.1 314 67.8
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.6e-106 390.2 325 66.2
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.6e-106 390.2 316 67.7
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 5.9e-106 388.3 258 75.6
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 2.9e-105 386.0 282 69.5
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 3.8e-105 385.6 326 65.0
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.2e-103 380.6 309 65.4
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.6e-103 380.2 319 66.1
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 4.7e-103 378.6 319 64.3
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 2.3e-102 376.3 356 59.0
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.4e-101 372.1 311 63.7
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 3.7e-100 369.0 321 66.0
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.1e-99 367.5 295 66.1
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 2.4e-99 366.3 321 63.6
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 3.1e-99 365.9 320 63.1
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 4.1e-99 365.5 307 63.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 4.1e-99 365.5 321 64.2
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 5.4e-99 365.2 317 64.4
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.2e-98 364.0 252 71.8
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 1.6e-98 363.6 317 64.0
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.0e-97 360.9 305 63.9
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 2.9e-97 359.4 316 62.7
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 2.9e-97 359.4 295 66.1
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 5.0e-97 358.6 238 73.1
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 8.6e-97 357.8 326 61.7
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.1e-96 357.5 317 62.8
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.1e-96 357.5 311 62.4
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.9e-96 356.7 252 71.0
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.5e-96 356.3 292 66.4
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 4.2e-96 355.5 313 61.7
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 9.5e-96 354.4 318 60.4
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 2.1e-95 353.2 284 66.9
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 3.6e-95 352.4 314 59.9
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 4.7e-95 352.1 315 62.2
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.8e-94 350.1 332 59.6
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 2.3e-94 349.7 348 58.0
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.3e-94 349.7 256 72.3
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 5.2e-94 348.6 320 61.6
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 6.8e-94 348.2 315 61.0
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.6e-93 346.3 312 61.5
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 4.4e-93 345.5 313 59.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 4.4e-93 345.5 291 61.5
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 1.7e-92 343.6 318 59.7
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 1.7e-92 343.6 318 59.7
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 1.7e-92 343.6 270 67.4
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 2.2e-92 343.2 313 58.8
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.3e-92 341.7 329 59.6
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.1e-91 340.9 197 84.3
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.0e-90 336.7 216 75.9
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 2.7e-90 336.3 286 64.7
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.5e-88 330.5 307 58.0
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.3e-88 328.9 214 75.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.0e-85 320.1 321 56.1
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.6e-79 299.3 176 82.4
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 8.9e-78 294.7 175 83.4
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 5.8e-77 292.0 224 66.5
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 6.4e-76 288.5 230 66.1
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.9e-75 287.0 317 52.7
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 4.6e-74 282.3 261 59.4
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.1e-72 277.7 186 73.1
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.7e-65 253.8 235 60.9
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 2.5e-64 250.0 199 58.8
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.1e-62 244.6 244 56.6
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 3.1e-62 243.0 208 60.6
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 4.4e-61 239.2 197 59.9
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.5e-56 224.2 230 57.4
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.2e-53 214.5 210 52.4
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.3e-52 211.1 251 47.0
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.1e-43 178.7 164 55.5
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.8e-38 164.1 231 40.7
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 3.1e-38 163.3 125 62.4
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 2.9e-36 156.8 235 38.7
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.1e-30 136.7 96 70.8
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.5e-29 134.4 91 73.6
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.0e-28 131.7 86 73.3
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 3.8e-28 129.8 120 50.8
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 6.7e-25 119.0 61 93.4
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 8.2e-23 112.1 75 76.0
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 1.4e-09 68.2 147 32.7
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.8e-09 67.8 37 83.8


User provided reference genes

Program Settings