Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5825 Fragaria x ananassa HOM05D003567 ORTHO05D004117 1.2e-70 269.6 131 100.0
FvH4_6g04930 Fragaria vesca HOM05D003567 ORTHO05D004117 3.9e-48 194.9 97 99.0
RcHm_v2.0_Chr3g0453431 Rosa chinensis HOM05D003567 ORTHO05D004117 1.6e-33 146.4 115 67.8
FvH4_6g04940 Fragaria vesca HOM05D003567 ORTHO05D004117 2.3e-32 142.5 116 69.0
FAN14G3462 Fragaria x ananassa HOM05D003567 ORTHO05D004117 8.7e-32 140.6 116 68.1
Prupe.6G333000 Prunus persica HOM05D003567 ORTHO05D004117 8.7e-24 114.0 121 56.2
CAN.G836.16 Capsicum annuum HOM05D003567 ORTHO05D004117 6.2e-22 107.8 94 62.8
TAR362G0113 Trochodendron aralioides HOM05D003567 ORTHO05D004117 8.1e-22 107.5 106 57.5
Manes.08G124900 Manihot esculenta HOM05D003567 ORTHO05D004117 1.4e-21 106.7 104 59.6
Sopen02g034720 Solanum pennellii HOM05D003567 ORTHO05D004117 3.1e-21 105.5 94 63.8
PGSC0003DMG400010083 Solanum tuberosum HOM05D003567 ORTHO05D004117 3.1e-21 105.5 94 63.8
CSS0000473 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 4.0e-21 105.1 101 57.4
CSS0010999 Camellia sinensis var. sinensis HOM05D003567 ORTHO05D004117 4.0e-21 105.1 101 57.4
Gohir.D11G270600 Gossypium hirsutum HOM05D003567 ORTHO05D004117 4.0e-21 105.1 106 57.5
Gorai.007G291100 Gossypium raimondii HOM05D003567 ORTHO05D004117 4.0e-21 105.1 106 57.5
Thecc.05G296900 Theobroma cacao HOM05D003567 ORTHO05D004117 4.0e-21 105.1 106 58.5
Sabra13G0029300 Salix brachista HOM05D003567 ORTHO05D004117 5.3e-21 104.8 113 54.0
Solyc02g090020.4 Solanum lycopersicum HOM05D003567 ORTHO05D004117 5.3e-21 104.8 94 62.8
Ciclev10001775m.g Citrus clementina HOM05D003567 ORTHO05D004117 1.2e-20 103.6 107 55.1
Rhsim05G0146400 Rhododendron simsii HOM05D003567 ORTHO05D004117 1.2e-20 103.6 112 52.7
Sed0017789 Sechium edule HOM05D003567 ORTHO05D004117 1.5e-20 103.2 98 58.2
VMungo0540G1876 Vigna mungo HOM05D003567 ORTHO05D004117 1.5e-20 103.2 78 69.2
CiPaw.08G174900 Carya illinoinensis HOM05D003567 ORTHO05D004117 2.0e-20 102.8 104 57.7
Haze_04266 Corylus avellana HOM05D003567 ORTHO05D004117 2.0e-20 102.8 107 57.0
Gohir.A11G260300 Gossypium hirsutum HOM05D003567 ORTHO05D004117 2.0e-20 102.8 106 55.7
MD04G1212700 Malus domestica HOM05D003567 ORTHO05D004117 2.0e-20 102.8 120 53.3
Nitab4.5_0008257g0040 Nicotiana tabacum HOM05D003567 ORTHO05D004117 2.0e-20 102.8 78 67.9
PGR031G0264 Punica granatum HOM05D003567 ORTHO05D004117 2.0e-20 102.8 90 58.9
Duzib177G1144 Durio zibethinus HOM05D003567 ORTHO05D004117 2.6e-20 102.4 115 54.8
Glyma.03G241900 Glycine max HOM05D003567 ORTHO05D004117 2.6e-20 102.4 78 69.2
GSVIVG01022011001 Vitis vinifera HOM05D003567 ORTHO05D004117 3.4e-20 102.1 102 55.9
Cfa006520 Carpinus fangiana HOM05D003567 ORTHO05D004117 4.5e-20 101.7 107 57.0
Cpa.g.sc84.115 Carica papaya HOM05D003567 ORTHO05D004117 5.8e-20 101.3 96 59.4
Dinv22925 Davidia involucrata HOM05D003567 ORTHO05D004117 5.8e-20 101.3 106 55.7
Lalb_Chr18g0045341 Lupinus albus HOM05D003567 ORTHO05D004117 7.6e-20 100.9 78 67.9
Nitab4.5_0000327g0090 Nicotiana tabacum HOM05D003567 ORTHO05D004117 7.6e-20 100.9 78 66.7
Potri.013G029000 Populus trichocarpa HOM05D003567 ORTHO05D004117 7.6e-20 100.9 78 66.7
Aqoxy2G03161 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 1.3e-19 100.1 125 52.0
Thhalv10004533m.g Eutrema salsugineum HOM05D003567 ORTHO05D004117 1.3e-19 100.1 89 60.7
Oeu025239.1 Olea europaea HOM05D003567 ORTHO05D004117 1.3e-19 100.1 75 69.3
Cc02_g32800 Coffea canephora HOM05D003567 ORTHO05D004117 1.7e-19 99.8 78 66.7
THA.LOC104802813 Tarenaya hassleriana HOM05D003567 ORTHO05D004117 1.7e-19 99.8 109 53.2
CANSAT54G0395 Cannabis sativa HOM05D003567 ORTHO05D004117 2.2e-19 99.4 105 54.3
Peaxi162Scf00338g00312 Petunia axillaris HOM05D003567 ORTHO05D004117 2.2e-19 99.4 79 64.6
COL.COLO4_13563 Corchorus olitorius HOM05D003567 ORTHO05D004117 2.9e-19 99.0 105 54.3
AT5G27290 Arabidopsis thaliana HOM05D003567 ORTHO05D004117 4.9e-19 98.2 89 58.4
Eucgr.H04431 Eucalyptus grandis HOM05D003567 ORTHO05D004117 4.9e-19 98.2 108 50.0
MBI10_g29587_MAGBIO Magnolia biondii HOM05D003567 ORTHO05D004117 4.9e-19 98.2 86 60.5
Phvul.006G095900 Phaseolus vulgaris HOM05D003567 ORTHO05D004117 4.9e-19 98.2 78 66.7
Ca_09384_v3 Cicer arietinum L. HOM05D003567 ORTHO05D004117 6.5e-19 97.8 78 65.4
Lj1g0016651 Lotus japonicus HOM05D003567 ORTHO05D004117 6.5e-19 97.8 115 53.0
Atru.chr2.536 Acer truncatum HOM05D003567 ORTHO05D004117 8.4e-19 97.4 79 63.3
arahy.Tifrunner.gnm1.ann1.BBX3WJ Arachis hypogaea HOM05D003567 ORTHO05D004117 8.4e-19 97.4 90 60.0
EL10Ac4g09285 Beta vulgaris HOM05D003567 ORTHO05D004117 8.4e-19 97.4 78 65.4
arahy.Tifrunner.gnm1.ann1.86SZEE Arachis hypogaea HOM05D003567 ORTHO05D004117 1.1e-18 97.1 87 58.6
BcaB04g19661 Brassica carinata HOM05D003567 ORTHO05D004117 1.4e-18 96.7 79 64.6
BcaC04g23687 Brassica carinata HOM05D003567 ORTHO05D004117 1.4e-18 96.7 79 64.6
Medtr7g114070 Medicago truncatula HOM05D003567 ORTHO05D004117 1.9e-18 96.3 89 61.8
Psat3g009280 Pisum sativum HOM05D003567 ORTHO05D004117 2.5e-18 95.9 78 66.7
SGA_v2.0_scaffold21G09407 Striga asiatica HOM05D003567 ORTHO05D004117 3.2e-18 95.5 78 62.8
BcaB04g19664 Brassica carinata HOM05D003567 ORTHO05D004117 7.1e-18 94.4 79 63.3
BcaC04g23684 Brassica carinata HOM05D003567 ORTHO05D004117 7.1e-18 94.4 79 63.3
BolC9t53498H Brassica oleracea HOM05D003567 ORTHO05D004117 7.1e-18 94.4 79 63.3
Carub.0006s2522 Capsella rubella HOM05D003567 ORTHO05D004117 7.1e-18 94.4 89 57.3
ClCG03G016590 Citrullus lanatus HOM05D003567 ORTHO05D004117 7.1e-18 94.4 93 54.8
Nn3g21224 Nelumbo nucifera HOM05D003567 ORTHO05D004117 9.3e-18 94.0 78 64.1
A09p05230 Brassica napus HOM05D003567 ORTHO05D004117 1.2e-17 93.6 79 63.3
BraA09t36162Z Brassica rapa HOM05D003567 ORTHO05D004117 1.2e-17 93.6 79 63.3
CiPaw.08G170300 Carya illinoinensis HOM05D003567 ORTHO05D004117 1.2e-17 93.6 75 65.3
Sp2g20530 Schrenkiella parvula HOM05D003567 ORTHO05D004117 1.2e-17 93.6 79 64.6
vmacro19654 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 1.2e-17 93.6 109 51.4
AL6G39790 Arabidopsis lyrata HOM05D003567 ORTHO05D004117 1.6e-17 93.2 79 63.3
DCAR_016974 Daucus carota HOM05D003567 ORTHO05D004117 1.6e-17 93.2 97 54.6
TPR.G21793 Trifolium pratense HOM05D003567 ORTHO05D004117 1.6e-17 93.2 89 59.6
MELO3C015365.2 Cucumis melo HOM05D003567 ORTHO05D004117 2.1e-17 92.8 96 54.2
SalBow1G3301 Salvia bowleyana HOM05D003567 ORTHO05D004117 2.1e-17 92.8 74 63.5
Lsat_1_v5_gn_5_38921 Lactuca sativa HOM05D003567 ORTHO05D004117 3.5e-17 92.0 78 61.5
C09p05690 Brassica napus HOM05D003567 ORTHO05D004117 4.6e-17 91.7 79 62.0
CARHR185910 Cardamine hirsuta HOM05D003567 ORTHO05D004117 4.6e-17 91.7 89 56.2
QL03p003527 Quercus lobata HOM05D003567 ORTHO05D004117 4.6e-17 91.7 132 45.5
Aa31LG11G9050 Aethionema arabicum HOM05D003567 ORTHO05D004117 6.0e-17 91.3 78 60.3
CsaV3_1G039400 Cucumis sativus L. HOM05D003567 ORTHO05D004117 6.0e-17 91.3 96 53.1
Migut.L01512 Erythranthe guttata HOM05D003567 ORTHO05D004117 6.0e-17 91.3 78 61.5
Hund07025 Selenicereus undatus HOM05D003567 ORTHO05D004117 7.9e-17 90.9 78 60.3
AUR62000902 Chenopodium quinoa HOM05D003567 ORTHO05D004117 1.0e-16 90.5 79 62.0
QL03p002916 Quercus lobata HOM05D003567 ORTHO05D004117 1.0e-16 90.5 132 45.5
CDE05G1895 Ceratophyllum demersum HOM05D003567 ORTHO05D004117 2.3e-16 89.4 78 57.7
AUR62005073 Chenopodium quinoa HOM05D003567 ORTHO05D004117 2.3e-16 89.4 78 61.5
PSO170G0105 Papaver somniferum HOM05D003567 ORTHO05D004117 3.9e-16 88.6 78 59.0
Sc06g0003450 Simmondsia chinensis HOM05D003567 ORTHO05D004117 3.9e-16 88.6 78 62.8
HanXRQChr16g0512311 Helianthus annuus HOM05D003567 ORTHO05D004117 6.7e-16 87.8 73 63.0
Lj9A677T42 Lonicera japonica HOM05D003567 ORTHO05D004117 6.7e-16 87.8 79 63.3
PSO302G0281 Papaver somniferum HOM05D003567 ORTHO05D004117 6.7e-16 87.8 79 57.0
MSTRG.10545 Avicennia marina HOM05D003567 ORTHO05D004117 1.9e-15 86.3 73 60.3
Cfa016693 Carpinus fangiana HOM05D000079 ORTHO05D000211 4.3e-15 85.1 87 54.0
PSO302G0180 Papaver somniferum HOM05D003567 ORTHO05D004117 5.7e-15 84.7 78 59.0
PSO170G3637 Papaver somniferum HOM05D003567 ORTHO05D004117 3.7e-14 82.0 78 57.7
Actinidia28391 Actinidia chinensis HOM05D003567 ORTHO05D004117 1.8e-13 79.7 78 56.4
AUR62033882 Chenopodium quinoa HOM05D003567 ORTHO05D004117 1.8e-13 79.7 78 57.7
Os01g0382700 Oryza sativa ssp. japonica HOM05D003567 ORTHO05D004117 1.8e-13 79.7 78 55.1
ECA246G1301 Erigeron canadensis HOM05D003567 ORTHO05D004117 4.1e-13 78.6 74 59.5
ATR0487G007 Amborella trichopoda HOM05D003567 ORTHO05D004117 9.0e-13 77.4 78 55.1
unitig_578.g16416 Utricularia gibba HOM05D003567 ORTHO05D004117 5.9e-12 74.7 78 51.3
MBI10_g37183_MAGBIO Magnolia biondii HOM05D003567 ORTHO05D004117 2.9e-11 72.4 74 52.7
SEGI_02572 Sequoiadendron giganteum HOM05D003567 ORTHO05D004117 2.5e-10 69.3 77 50.6
Dinv40231 Davidia involucrata HOM05D003567 ORTHO05D004117 1.0e-08 63.9 74 45.9
TAR365G0081 Trochodendron aralioides HOM05D003567 ORTHO05D004117 1.5e-07 60.1 77 45.5
Actinidia30900 Actinidia chinensis HOM05D003567 ORTHO05D004117 2.5e-07 59.3 74 43.2
Rhsim07G0178200 Rhododendron simsii HOM05D003567 ORTHO05D004117 2.5e-07 59.3 73 45.2
Aqoxy2G03162 Aquilegia oxysepala HOM05D003567 ORTHO05D004117 4.3e-07 58.5 79 41.8
Oeu033946.2 Olea europaea HOM05D003567 ORTHO05D004117 4.3e-07 58.5 80 46.2
vmacro05046 Vaccinium macrocarpon HOM05D003567 ORTHO05D004117 2.8e-06 55.8 73 41.1
Ah.06g190360 Amaranthus hybridus HOM05D003567 ORTHO05D018272 8.2e-06 54.3 73 45.2


User provided reference genes

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