Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5757 Fragaria x ananassa HOM05D001087 ORTHO05D005406 7.5e-178 627.1 321 100.0
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 2.6e-170 602.1 358 88.5
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 3.9e-166 588.2 358 86.0
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 1.2e-156 556.6 357 81.5
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 1.8e-139 499.6 358 72.3
FAN05G2313 Fragaria x ananassa HOM05D001087 ORTHO05D005406 3.1e-139 498.8 256 99.2
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 4.0e-139 498.4 258 98.8
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 2.6e-138 495.7 358 71.5
Cpa.g.sc70.28 Carica papaya HOM05D001087 ORTHO05D005406 1.7e-137 493.0 358 69.8
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 1.7e-137 493.0 358 71.5
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 2.2e-137 492.7 358 70.7
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 9.3e-136 487.3 354 72.6
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 1.2e-135 486.9 358 69.8
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 8.7e-134 480.7 361 69.3
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 1.5e-133 479.9 357 70.6
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 2.5e-133 479.2 356 69.7
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 5.6e-133 478.0 361 68.4
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 3.6e-132 475.3 358 68.4
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 8.1e-132 474.2 358 67.9
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 5.3e-131 471.5 357 68.6
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 5.3e-131 471.5 357 68.6
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 1.2e-130 470.3 358 69.8
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 9.9e-130 467.2 359 68.5
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 9.9e-130 467.2 357 68.1
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 9.3e-128 460.7 358 65.9
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 1.2e-127 460.3 358 65.9
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 1.6e-127 459.9 358 65.9
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 2.1e-127 459.5 358 66.5
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 2.1e-127 459.5 364 67.3
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 2.7e-127 459.1 358 65.4
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 4.6e-127 458.4 358 65.6
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 4.6e-127 458.4 358 65.9
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 1.0e-126 457.2 358 66.2
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 2.3e-126 456.1 358 65.9
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 3.9e-126 455.3 358 65.6
ClCG05G012390 Citrullus lanatus HOM05D001087 ORTHO05D005406 8.7e-126 454.1 357 65.3
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 1.1e-125 453.8 358 65.6
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 3.3e-125 452.2 358 64.5
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 4.3e-125 451.8 358 65.4
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 2.8e-124 449.1 358 65.1
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 2.8e-124 449.1 359 64.3
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 3.7e-124 448.7 320 68.8
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 1.8e-123 446.4 354 65.0
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 5.3e-123 444.9 361 63.2
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 6.9e-123 444.5 247 92.3
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 9.9e-122 440.7 360 62.5
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 2.2e-121 439.5 358 64.8
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 3.8e-121 438.7 358 64.0
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 8.4e-121 437.6 356 62.1
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 1.4e-120 436.8 358 63.7
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 5.5e-120 434.9 361 62.0
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 1.6e-119 433.3 360 61.4
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 3.5e-119 432.2 359 61.8
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 6.0e-119 431.4 356 63.8
vmacro22106 Vaccinium macrocarpon HOM05D001087 ORTHO05D005406 5.1e-118 428.3 417 57.1
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 1.1e-117 427.2 361 61.2
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 1.1e-117 427.2 361 61.2
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 5.6e-117 424.9 358 62.3
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 9.6e-117 424.1 362 60.8
Eucgr.G01904 Eucalyptus grandis HOM05D001087 ORTHO05D005406 1.8e-115 419.9 361 61.5
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 1.8e-115 419.9 366 60.7
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 4.0e-115 418.7 354 61.3
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 1.2e-114 417.2 378 57.9
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 3.4e-114 415.6 306 69.3
CAN.G473.166 Capsicum annuum HOM05D001087 ORTHO05D005406 5.8e-114 414.8 366 60.4
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 2.9e-113 412.5 324 69.1
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 1.9e-112 409.8 352 59.7
Psat0s4626g0040 Pisum sativum HOM05D001087 ORTHO05D005406 5.5e-112 408.3 317 67.2
Lj7A620G39 Lonicera japonica HOM05D001087 ORTHO05D005406 2.1e-111 406.4 360 61.1
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.3e-110 403.7 358 59.5
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 1.1e-109 400.6 361 59.0
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 1.5e-109 400.2 347 60.5
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 8.2e-108 394.4 354 57.6
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 2.6e-106 389.4 389 54.2
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 3.4e-106 389.0 332 60.2
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 3.4e-106 389.0 360 60.0
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 3.2e-104 382.5 357 55.5
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 1.2e-103 380.6 349 57.9
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 5.3e-99 365.2 356 53.9
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 2.0e-98 363.2 362 56.4
Nitab4.5_0002901g0060 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.0e-97 360.9 364 56.0
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 6.1e-95 351.7 247 71.3
BcaC05g25140 Brassica carinata HOM05D001087 ORTHO05D005406 1.4e-94 350.5 363 54.3
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 2.6e-93 346.3 392 51.0
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 2.6e-93 346.3 365 54.2
Haze_14337 Corylus avellana HOM05D001087 ORTHO05D005406 1.9e-88 330.1 286 64.0
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 3.2e-88 329.3 352 50.0
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 2.1e-87 326.6 426 46.0
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 3.6e-87 325.9 356 48.9
HPP92_021716 Vanilla planifolia HOM05D001087 ORTHO05D005406 4.5e-82 308.9 297 53.9
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 2.3e-78 296.6 193 75.1
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 3.7e-76 289.3 351 44.4
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 1.4e-75 287.3 358 43.3
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 1.4e-75 287.3 358 43.3
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 2.3e-70 270.0 194 68.0
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 8.8e-70 268.1 329 47.4
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 4.2e-64 249.2 249 55.0
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 3.6e-55 219.5 311 40.5
DCAR_000958 Daucus carota HOM05D001087 ORTHO05D005406 2.9e-52 209.9 193 59.1
Peaxi162Scf00420g00943 Petunia axillaris HOM05D001087 ORTHO05D005406 2.0e-50 203.8 210 54.8
HPP92_021631 Vanilla planifolia HOM05D001087 ORTHO05D005406 6.2e-47 192.2 150 60.0
Nitab4.5_0000519g0370 Nicotiana tabacum HOM05D001087 ORTHO05D005406 2.7e-42 176.8 117 75.2
Thhalv10017610m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 1.1e-38 164.9 153 55.6
Nitab4.5_0005199g0050 Nicotiana tabacum HOM05D001087 ORTHO05D005406 4.0e-38 162.9 189 47.6
Glyma.04G126700 Glycine max HOM05D001087 ORTHO05D005406 3.4e-37 159.8 114 66.7
Glyma.09G128151 Glycine max HOM05D001087 ORTHO05D005406 3.4e-37 159.8 114 66.7
Solyc02g094600.2 Solanum lycopersicum HOM05D001087 ORTHO05D005406 5.4e-35 152.5 175 51.4
Nitab4.5_0000136g0080 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.3e-28 131.3 186 42.5
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 2.9e-28 130.2 343 26.2
HPP92_021630 Vanilla planifolia HOM05D001087 ORTHO05D005406 6.0e-26 122.5 138 48.6
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 5.6e-24 115.9 96 60.4
SEGI_07003 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 2.1e-23 114.0 96 55.2
SEGI_28776 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 4.4e-21 106.3 74 64.9
Os11g0543800 Oryza sativa ssp. japonica HOM05D001087 ORTHO05D005406 1.0e-17 95.1 71 57.7
Lsat_1_v5_gn_5_71520 Lactuca sativa HOM05D000842 ORTHO05D000650 5.1e-17 92.8 115 51.3
BcaC05g25411 Brassica carinata HOM05D001087 ORTHO05D005406 1.1e-16 91.7 63 69.8
Haze_14336 Corylus avellana HOM05D001087 ORTHO05D005406 3.3e-16 90.1 63 71.4
Peaxi162Scf00420g00935 Petunia axillaris HOM05D001087 ORTHO05D005406 6.4e-12 75.9 63 60.3
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 2.8e-07 60.5 43 67.4
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 2.4e-06 57.4 43 65.1


User provided reference genes

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