Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.9e-100 367.5 176 100.0
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 1.4e-56 223.4 111 95.5
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-56 223.4 111 95.5
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-56 223.0 111 94.6
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.8e-56 221.1 111 94.6
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 2.9e-54 215.7 111 91.9
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 6.4e-54 214.5 111 91.9
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-48 196.4 121 80.2
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.7e-44 182.6 111 74.8
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 2.5e-42 176.0 111 73.0
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.5e-42 176.0 111 73.0
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 7.3e-42 174.5 111 73.0
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 9.5e-42 174.1 111 72.1
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 1.2e-41 173.7 111 70.3
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 2.1e-41 172.9 111 71.2
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 2.1e-41 172.9 111 71.2
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 2.1e-41 172.9 111 68.5
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 2.8e-41 172.6 111 71.2
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 2.8e-41 172.6 111 71.2
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 8.1e-41 171.0 111 71.2
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-40 170.6 158 59.5
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 1.4e-40 170.2 111 69.4
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 1.4e-40 170.2 129 63.6
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 1.8e-40 169.9 111 71.2
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 1.8e-40 169.9 144 59.0
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 2.3e-40 169.5 110 70.9
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 3.1e-40 169.1 111 69.4
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 3.1e-40 169.1 111 70.3
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 4.0e-40 168.7 111 68.5
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 4.0e-40 168.7 111 68.5
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 4.0e-40 168.7 111 69.4
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 5.2e-40 168.3 111 71.2
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 8.9e-40 167.5 111 69.4
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 8.9e-40 167.5 111 69.4
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 2.0e-39 166.4 111 66.7
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 2.6e-39 166.0 110 70.0
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.6e-39 166.0 111 68.5
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 2.6e-39 166.0 111 68.5
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 3.4e-39 165.6 111 68.5
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 3.4e-39 165.6 111 66.7
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 4.4e-39 165.2 111 67.6
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 4.4e-39 165.2 111 66.7
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 7.5e-39 164.5 110 70.0
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 7.5e-39 164.5 111 67.6
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 9.9e-39 164.1 111 65.8
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 1.3e-38 163.7 115 66.1
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 1.3e-38 163.7 81 93.8
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.7e-38 163.3 140 58.6
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 1.7e-38 163.3 111 65.8
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 2.2e-38 162.9 110 67.3
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 3.7e-38 162.2 125 64.0
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 3.7e-38 162.2 110 67.3
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 4.9e-38 161.8 111 64.0
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 4.9e-38 161.8 110 69.1
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 1.9e-37 159.8 111 65.8
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 1.9e-37 159.8 125 60.8
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 2.4e-37 159.5 125 62.4
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 5.4e-37 158.3 111 66.7
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 5.4e-37 158.3 111 65.8
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 7.1e-37 157.9 111 67.6
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.2e-36 157.1 111 65.8
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 1.2e-36 157.1 110 65.5
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.6e-36 156.8 111 64.9
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 2.7e-36 156.0 111 63.1
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 3.5e-36 155.6 111 64.0
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 7.8e-36 154.5 109 65.1
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 2.3e-35 152.9 108 61.1
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 3.0e-35 152.5 106 64.2
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 3.0e-35 152.5 111 62.2
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 5.1e-35 151.8 111 64.0
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 6.6e-35 151.4 109 61.5
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 8.6e-35 151.0 112 60.7
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 4.3e-34 148.7 111 64.0
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 7.3e-34 147.9 110 63.6
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 7.3e-34 147.9 111 61.3
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 1.2e-33 147.1 110 60.9
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 1.6e-33 146.7 111 61.3
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 1.8e-32 143.3 111 61.3
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 1.8e-32 143.3 111 58.6
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 1.8e-32 143.3 111 58.6
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 3.1e-32 142.5 111 61.3
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 3.1e-32 142.5 125 54.4
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 4.0e-32 142.1 111 61.3
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 4.0e-32 142.1 111 59.5
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 5.2e-32 141.7 111 60.4
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 6.8e-32 141.4 108 62.0
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 2.0e-31 139.8 111 60.4
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 2.6e-31 139.4 89 77.5
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 7.6e-31 137.9 126 54.8
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 1.7e-30 136.7 111 59.5
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 2.2e-30 136.3 160 44.4
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 2.4e-29 132.9 112 59.8
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 1.2e-28 130.6 112 58.9
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 1.2e-28 130.6 112 58.9
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.7e-28 129.4 112 58.0
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 3.5e-28 129.0 112 58.0
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.3e-27 127.1 63 93.7
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 8.7e-27 124.4 115 53.9
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 1.5e-26 123.6 111 51.4
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 1.9e-26 123.2 153 49.7
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 5.6e-26 121.7 125 52.0
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 3.6e-25 119.0 111 50.5
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 1.5e-23 113.6 100 52.0
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.0e-23 113.2 134 52.2
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 1.3e-22 110.5 112 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 3.8e-22 109.0 111 42.3
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.9e-22 108.6 54 94.4
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 1.9e-21 106.7 54 92.6
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 5.4e-21 105.1 164 36.0
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.6e-20 103.6 54 90.7
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 1.6e-20 103.6 102 45.1
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 8.7e-19 97.8 82 59.8
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 1.8e-16 90.1 86 46.5
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 9.9e-15 84.3 72 58.3
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 6.0e-12 75.1 53 66.0
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 1.5e-10 70.5 145 35.2


User provided reference genes

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