Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.4e-69 266.2 130 100.0
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-69 266.2 130 100.0
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.0e-65 252.3 130 95.4
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.8e-61 237.3 119 97.5
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.0e-60 235.7 119 96.6
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.9e-57 224.2 131 87.8
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.9e-39 166.0 137 65.0
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 2.3e-37 159.1 137 63.5
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 9.2e-34 147.1 138 60.9
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.7e-33 145.6 137 59.9
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 5.1e-32 141.4 135 57.0
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 5.1e-32 141.4 138 57.2
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 6.6e-32 141.0 138 58.7
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 8.6e-32 140.6 103 68.9
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.1e-31 140.2 131 60.3
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 7.3e-31 137.5 138 57.2
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.6e-30 136.3 141 54.6
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.6e-30 136.3 141 54.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.1e-30 136.0 101 68.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.8e-30 135.6 136 55.9
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.7e-30 134.8 141 53.9
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.4e-29 133.3 135 55.6
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.4e-29 133.3 140 53.6
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.8e-29 132.9 136 56.6
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 5.2e-29 131.3 101 65.3
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 8.9e-29 130.6 78 78.2
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.5e-28 129.8 135 52.6
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.5e-28 129.8 70 87.1
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.6e-28 129.0 118 58.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.6e-28 129.0 68 88.2
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 2.6e-28 129.0 135 54.1
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 3.4e-28 128.6 71 85.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.4e-28 128.6 130 58.5
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 7.5e-28 127.5 72 84.7
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.3e-27 126.7 102 62.7
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.7e-27 126.3 70 85.7
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.9e-27 124.8 140 53.6
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 6.4e-27 124.4 135 50.4
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.1e-26 123.6 136 55.1
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.4e-26 123.2 132 53.0
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 2.4e-26 122.5 86 70.9
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 3.2e-26 122.1 129 50.4
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 3.2e-26 122.1 118 56.8
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 5.4e-26 121.3 72 81.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 5.4e-26 121.3 109 61.5
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 9.2e-26 120.6 70 81.4
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 1.2e-25 120.2 68 85.3
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 2.7e-25 119.0 130 53.8
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 4.6e-25 118.2 133 51.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 7.8e-25 117.5 138 50.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 7.8e-25 117.5 118 55.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.0e-24 117.1 141 51.1
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.0e-24 117.1 122 53.3
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.3e-24 116.7 130 50.8
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.3e-24 116.7 135 51.1
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.3e-24 116.7 108 59.3
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 5.1e-24 114.8 123 53.7
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 6.6e-24 114.4 82 70.7
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 8.6e-24 114.0 127 53.5
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.1e-23 113.6 68 76.5
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 3.3e-23 112.1 70 72.9
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 4.3e-23 111.7 127 51.2
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 5.6e-23 111.3 90 63.3
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 7.3e-23 110.9 67 79.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.2e-22 110.2 78 67.9
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.2e-22 110.2 70 75.7
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.2e-22 110.2 72 76.4
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.1e-22 109.4 82 67.1
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.8e-22 109.0 72 75.0
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 2.8e-22 109.0 135 51.1
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 4.7e-22 108.2 67 76.1
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 4.7e-22 108.2 67 76.1
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 6.2e-22 107.8 67 76.1
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 6.2e-22 107.8 130 46.2
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 6.2e-22 107.8 67 76.1
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 8.1e-22 107.5 67 74.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.1e-21 107.1 65 76.9
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.8e-21 106.3 67 76.1
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.8e-21 106.3 89 61.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 4.0e-21 105.1 67 73.1
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 5.2e-21 104.8 67 74.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 5.2e-21 104.8 65 76.9
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 5.2e-21 104.8 76 65.8
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.0e-20 102.8 64 76.6
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 3.4e-20 102.1 87 60.9
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.4e-20 102.1 82 61.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 5.8e-20 101.3 68 75.0
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.3e-19 100.1 69 63.8
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 2.2e-19 99.4 133 45.1
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.9e-19 99.0 82 62.2
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.9e-19 99.0 82 62.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 2.9e-19 99.0 82 62.2
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.9e-19 99.0 79 64.6
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.9e-19 98.2 59 76.3
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 6.4e-19 97.8 82 61.0
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.4e-18 96.7 83 59.0
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 4.2e-18 95.1 67 67.2
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.5e-17 92.0 66 68.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.5e-17 92.0 66 68.2
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.0e-16 90.5 125 44.0
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 2.3e-16 89.4 108 50.0
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 3.0e-16 89.0 112 45.5
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 5.1e-16 88.2 64 64.1
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.9e-15 86.3 62 71.0
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.8e-14 82.4 67 62.7
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.8e-13 79.7 66 54.5
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.5e-12 76.6 53 64.2
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.6e-09 65.1 56 64.3
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.6e-09 65.1 56 64.3


User provided reference genes

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