Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1641.3 883 100.0
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 0.0e+00 1634.0 883 99.5
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1614.7 883 94.3
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1614.4 883 94.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1524.6 883 93.7
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1507.3 897 89.2
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1495.7 883 92.2
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1358.6 897 81.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 0.0e+00 1217.2 896 75.4
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 0.0e+00 1178.7 903 73.8
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 0.0e+00 1148.7 897 73.5
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1136.3 905 69.9
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 0.0e+00 1134.0 905 71.0
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1125.9 904 70.9
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 0.0e+00 1122.1 904 71.7
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 0.0e+00 1115.5 899 70.3
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 0.0e+00 1113.2 904 68.3
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1112.4 905 68.1
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1099.7 904 68.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.1e-306 1055.0 907 65.9
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 4.0e-306 1054.7 861 70.2
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.2e-305 1053.1 857 69.5
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 3.7e-304 1048.1 908 65.0
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.2e-302 1043.1 910 64.2
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.2e-302 1043.1 894 64.9
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.6e-302 1041.2 910 64.0
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 1.2e-299 1033.1 901 67.7
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 6.2e-299 1030.8 907 64.9
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.4e-298 1029.6 907 65.3
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 6.8e-298 1027.3 907 67.3
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.4e-297 1025.0 900 65.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.1e-294 1015.8 907 64.7
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.7e-293 1012.7 916 63.1
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.1e-293 1011.1 906 62.9
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 8.7e-293 1010.4 887 63.1
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.5e-292 1008.8 906 64.2
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.5e-292 1008.8 906 62.8
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 5.6e-292 1007.7 901 64.3
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 1.2e-291 1006.5 915 63.7
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 8.1e-291 1003.8 915 63.6
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.4e-290 1003.0 807 69.9
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 4.0e-290 1001.5 793 72.0
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 4.0e-290 1001.5 793 72.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 6.9e-290 1000.7 910 62.7
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 4.4e-289 998.0 915 64.4
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 2.9e-288 995.3 897 65.4
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 7.1e-287 990.7 902 63.0
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.2e-286 989.9 915 63.4
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 3.0e-285 985.3 901 65.8
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.1e-284 983.4 893 62.5
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 9.6e-284 980.3 901 63.3
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.3e-283 979.9 901 65.5
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 3.1e-282 975.3 916 64.4
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.1e-282 975.3 914 61.1
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 4.0e-282 974.9 887 63.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 6.9e-282 974.2 916 64.3
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 6.9e-282 974.2 901 65.5
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.5e-281 973.0 887 64.4
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.5e-281 973.0 887 64.4
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.6e-281 972.2 897 63.2
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 2.6e-281 972.2 897 64.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.5e-281 971.5 891 64.2
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 5.8e-281 971.1 887 64.3
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.2e-280 969.1 914 61.7
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.8e-280 968.4 890 64.0
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.4e-279 966.5 914 61.5
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 5.6e-276 954.5 781 69.1
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.8e-275 951.4 879 61.9
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 6.2e-275 951.0 864 64.5
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 5.8e-273 944.5 901 62.6
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 4.6e-270 934.9 859 63.8
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 6.0e-270 934.5 894 59.1
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.8e-269 932.9 896 61.9
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 3.0e-269 932.2 898 60.4
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 2.1e-267 926.0 886 61.4
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 4.8e-267 924.9 898 61.1
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 4.8e-267 924.9 908 60.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.9e-264 915.6 907 58.0
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.8e-261 906.4 859 61.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 2.8e-259 899.0 905 62.0
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 4.1e-258 895.2 905 63.0
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 8.8e-253 877.5 898 59.1
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.1e-252 877.1 918 57.1
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 2.5e-252 875.9 899 58.3
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 5.3e-250 868.2 907 57.8
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 9.1e-250 867.5 866 61.0
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 3.4e-249 865.5 912 57.7
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.1e-246 856.3 915 56.5
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 3.9e-245 852.0 856 59.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.0e-240 837.4 895 57.8
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.3e-236 822.4 898 55.7
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 3.3e-236 822.4 887 57.2
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 4.8e-235 818.5 909 57.9
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 4.5e-233 812.0 902 54.3
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 9.4e-231 804.3 901 57.4
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.2e-230 803.9 910 56.9
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.2e-230 803.9 907 53.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 9.7e-228 794.3 859 56.2
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 9.7e-228 794.3 858 57.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.1e-226 790.8 871 57.5
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 1.8e-226 790.0 881 57.5
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 2.4e-226 789.6 881 57.5
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 5.3e-226 788.5 892 56.1
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.3e-224 783.9 887 55.6
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.7e-224 783.5 769 58.1
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.0e-221 774.2 860 57.8
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.4e-220 769.2 900 54.2
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 8.3e-219 764.6 840 56.7
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 8.3e-219 764.6 898 54.5
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 5.4e-218 761.9 732 63.4
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 7.0e-218 761.5 886 54.2
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 4.5e-217 758.8 908 54.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 8.6e-216 754.6 897 53.0
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 8.0e-214 748.0 838 52.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.4e-213 747.3 900 51.7
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.4e-213 747.3 900 50.9
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.2e-212 744.2 842 55.1
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.6e-209 733.8 845 52.7
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.7e-209 733.0 872 53.4
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.2e-206 724.2 843 54.9
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.1e-206 723.4 846 54.3
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 6.4e-203 711.8 869 53.6
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.9e-202 710.3 865 52.8
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 3.5e-201 706.1 847 52.9
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.3e-200 704.1 881 50.6
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 6.6e-200 701.8 870 51.5
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.5e-199 700.7 913 53.5
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 3.3e-199 699.5 868 52.5
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.3e-199 699.5 914 53.4
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 3.6e-198 696.0 911 49.6
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 6.2e-198 695.3 850 52.8
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.1e-197 694.5 868 52.1
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 6.6e-192 675.2 809 54.5
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 8.6e-192 674.9 927 49.3
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 3.7e-187 659.4 755 55.2
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.9e-186 657.1 887 49.9
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 7.1e-186 655.2 909 49.9
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 1.6e-185 654.1 892 49.8
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 2.8e-182 643.3 770 55.1
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-179 634.4 911 49.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 3.8e-179 632.9 914 49.1
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 6.4e-179 632.1 762 51.8
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.2e-169 601.3 903 47.1
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 5.6e-167 592.4 871 48.2
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 7.3e-167 592.0 843 50.3
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 2.2e-163 580.5 841 48.0
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 5.8e-156 555.8 731 52.7
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 5.8e-156 555.8 883 47.7
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.3e-152 543.9 890 44.7
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.2e-140 505.0 738 49.9
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.1e-130 471.9 742 47.0
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 5.1e-128 463.0 451 58.3
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 4.5e-124 449.9 906 41.6
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 8.0e-121 439.1 913 40.6
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.0e-120 437.2 913 41.7
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.5e-119 434.9 648 49.1
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.5e-119 434.9 908 40.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.8e-118 430.6 920 42.1
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.4e-117 428.3 921 42.0
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 8.5e-115 419.1 357 67.8
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.2e-108 398.7 755 40.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 7.7e-108 396.0 889 38.0
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.9e-94 350.9 865 38.5
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.4e-85 321.2 1001 34.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 3.0e-83 314.3 314 54.5
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.3e-82 310.5 889 34.0
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 7.8e-68 263.1 376 44.4
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 5.6e-66 256.9 379 47.0
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.6e-65 254.2 464 42.7
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.4e-64 252.3 359 44.8
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.9e-64 249.6 297 47.8
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.7e-62 245.4 582 36.4
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.9e-62 243.8 298 48.3
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.7e-59 235.3 260 52.7
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 9.6e-58 229.6 263 70.0
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.6e-55 221.5 322 43.5
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.9e-53 215.3 364 39.3
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.4e-46 189.9 299 42.5
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.4e-45 188.3 176 55.7
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.4e-45 188.3 280 43.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 3.5e-44 184.5 97 97.9
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.1e-40 171.4 109 78.9
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.8e-19 102.4 157 40.8
FAN22G0087 Fragaria x ananassa HOM05D024163 ORTHO05D201659 1.4e-08 66.2 60 68.3
FAN10G0058 Fragaria x ananassa HOM05D024163 ORTHO05D208155 4.1e-08 64.7 60 66.7
FAN20G1809 Fragaria x ananassa HOM05D024163 ORTHO05D205019 4.1e-08 64.7 60 66.7


User provided reference genes

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