Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5412 Fragaria x ananassa HOM05D016781 ORTHO05D022609 1.5e-89 332.8 163 100.0
FvH4_6g15620 Fragaria vesca HOM05D016781 ORTHO05D022609 2.8e-88 328.6 163 98.8
FAN02G4157 Fragaria x ananassa HOM05D016781 ORTHO05D022609 6.7e-66 254.2 158 80.4
FAN02G4194 Fragaria x ananassa HOM05D016781 ORTHO05D022609 6.7e-66 254.2 158 80.4
FAN09G3053 Fragaria x ananassa HOM05D016781 ORTHO05D022609 3.0e-58 228.8 156 78.2
RcHm_v2.0_Chr3g0469211 Rosa chinensis HOM05D016781 ORTHO05D022609 3.1e-31 139.0 131 56.5
RcHm_v2.0_Chr3g0452711 Rosa chinensis HOM05D016527 ORTHO05D012518 3.0e-13 79.3 134 38.1
FvH4_6g04130 Fragaria vesca HOM05D016527 ORTHO05D012518 4.7e-11 72.0 131 38.2
FAN14G0803 Fragaria x ananassa HOM05D016527 ORTHO05D012518 4.7e-11 72.0 131 38.2
FAN02G0501 Fragaria x ananassa HOM05D016527 ORTHO05D012518 8.0e-11 71.2 131 38.2
PSO170G4777 Papaver somniferum HOM05D000040 ORTHO05D010772 8.9e-10 67.8 134 34.3
FAN09G0605 Fragaria x ananassa HOM05D016527 ORTHO05D012518 1.5e-09 67.0 151 35.8
SalBow5G3977 Salvia bowleyana HOM05D000040 ORTHO05D000759 4.4e-09 65.5 169 32.0
Aqoxy2G03086 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 5.8e-09 65.1 134 33.6
SGA_v2.0_scaffold232G43557 Striga asiatica HOM05D000040 ORTHO05D000759 9.8e-09 64.3 120 35.0
VMungo1127G2049 Vigna mungo HOM05D000040 ORTHO05D000267 2.2e-08 63.2 164 31.1
Rhsim02G0214300 Rhododendron simsii HOM05D000040 ORTHO05D000267 2.9e-08 62.8 119 37.8
Rhsim02G0215100 Rhododendron simsii HOM05D000040 ORTHO05D000267 2.9e-08 62.8 112 36.6
FAN03G1986 Fragaria x ananassa HOM05D000040 ORTHO05D000759 4.9e-08 62.0 120 34.2
Solyc10g009410.1 Solanum lycopersicum HOM05D000040 ORTHO05D000759 8.3e-08 61.2 120 36.7
Sopen10g005190 Solanum pennellii HOM05D000040 ORTHO05D000759 8.3e-08 61.2 120 36.7
Lalb_Chr17g0341971 Lupinus albus HOM05D000040 ORTHO05D000759 1.1e-07 60.8 120 32.5
Peaxi162Scf00218g00126 Petunia axillaris HOM05D000040 ORTHO05D000759 1.9e-07 60.1 122 35.2
Eucgr.A02019 Eucalyptus grandis HOM05D000040 ORTHO05D005142 2.4e-07 59.7 176 31.2
SEGI_12432 Sequoiadendron giganteum HOM05D000040 ORTHO05D000759 2.4e-07 59.7 120 31.7
PGSC0003DMG400018877 Solanum tuberosum HOM05D000040 ORTHO05D000759 2.4e-07 59.7 120 36.7
CSS0029395 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D000759 3.2e-07 59.3 118 33.9
Nitab4.5_0001715g0090 Nicotiana tabacum HOM05D000040 ORTHO05D000759 3.2e-07 59.3 122 36.1
PGR044G2040 Punica granatum HOM05D000040 ORTHO05D010772 3.2e-07 59.3 141 33.3
QL02p018408 Quercus lobata HOM05D000040 ORTHO05D001305 3.2e-07 59.3 125 35.2
TAR633G0307 Trochodendron aralioides HOM05D000040 ORTHO05D010772 3.2e-07 59.3 142 28.2
Nitab4.5_0007652g0010 Nicotiana tabacum HOM05D000040 ORTHO05D000759 4.1e-07 58.9 122 36.1
Ah.08g221130 Amaranthus hybridus HOM05D000040 ORTHO05D010772 5.4e-07 58.5 120 35.0
PGR044G1144 Punica granatum HOM05D000040 ORTHO05D010772 5.4e-07 58.5 141 33.3
Rhsim02G0214900 Rhododendron simsii HOM05D000040 ORTHO05D000267 5.4e-07 58.5 120 35.0
Aqoxy4G03084 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 7.1e-07 58.2 150 30.0
Rhsim02G0214400 Rhododendron simsii HOM05D000040 ORTHO05D000267 7.1e-07 58.2 121 37.2
Rhsim02G0214600 Rhododendron simsii HOM05D000040 ORTHO05D000267 7.1e-07 58.2 118 37.3
Aa31LG10G15810 Aethionema arabicum HOM05D000040 ORTHO05D000759 9.2e-07 57.8 124 33.1
A07p25780 Brassica napus HOM05D000040 ORTHO05D000759 9.2e-07 57.8 123 33.3
Eucgr.L01627 Eucalyptus grandis HOM05D000040 ORTHO05D001305 9.2e-07 57.8 164 30.5
EL10Ac7g16158 Beta vulgaris HOM05D000040 ORTHO05D010772 1.2e-06 57.4 150 32.7
Sabra18G0018400 Salix brachista HOM05D000040 ORTHO05D001305 1.2e-06 57.4 123 34.1
Sabra18G0018600 Salix brachista HOM05D000040 ORTHO05D001305 1.2e-06 57.4 123 35.8
Ah.02g129790 Amaranthus hybridus HOM05D000040 ORTHO05D000267 1.6e-06 57.0 157 30.6
ClCG04G001160 Citrullus lanatus HOM05D000040 ORTHO05D000267 1.6e-06 57.0 112 34.8
SGA_v2.0_scaffold305G47998 Striga asiatica HOM05D000040 ORTHO05D001305 1.6e-06 57.0 142 31.7
Aqoxy5G04104 Aquilegia oxysepala HOM05D000040 ORTHO05D001305 2.1e-06 56.6 123 35.8
BraA07t30218Z Brassica rapa HOM05D000040 ORTHO05D000759 2.1e-06 56.6 123 32.5
QL02p018341 Quercus lobata HOM05D000040 ORTHO05D001305 2.1e-06 56.6 124 34.7
ATR0706G037 Amborella trichopoda HOM05D000040 ORTHO05D038296 2.7e-06 56.2 142 31.0
Solyc05g016310.1 Solanum lycopersicum HOM05D000040 ORTHO05D005142 2.7e-06 56.2 129 30.2
Sopen05g013210 Solanum pennellii HOM05D000040 ORTHO05D005142 2.7e-06 56.2 129 30.2
TAR633G2115 Trochodendron aralioides HOM05D000040 ORTHO05D010772 2.7e-06 56.2 132 31.8
AT3G61820 Arabidopsis thaliana HOM05D000040 ORTHO05D000759 3.5e-06 55.8 123 34.1
CARHR172150 Cardamine hirsuta HOM05D000040 ORTHO05D000759 3.5e-06 55.8 121 33.9
Potri.018G015100 Populus trichocarpa HOM05D000040 ORTHO05D001305 3.5e-06 55.8 123 35.0
Eucgr.L01628 Eucalyptus grandis HOM05D000040 ORTHO05D001305 4.6e-06 55.5 166 31.3
Hma1.2p1_0592F.1_g185320 Hydrangea macrophylla HOM05D000040 ORTHO05D000759 4.6e-06 55.5 120 32.5
Lj7C566T1 Lonicera japonica HOM05D000040 ORTHO05D000267 4.6e-06 55.5 145 32.4
Peaxi162Scf00359g00043 Petunia axillaris HOM05D000040 ORTHO05D005142 4.6e-06 55.5 128 31.2
BraA04t15809Z Brassica rapa HOM05D000040 ORTHO05D000759 6.0e-06 55.1 124 34.7
DCAR_013067 Daucus carota HOM05D000040 ORTHO05D000267 6.0e-06 55.1 114 33.3
Lalb_Chr01g0012781 Lupinus albus HOM05D000040 ORTHO05D000267 6.0e-06 55.1 118 31.4
PGSC0003DMG400045370 Solanum tuberosum HOM05D000040 ORTHO05D005142 6.0e-06 55.1 129 29.5
Ah.01g013600 Amaranthus hybridus HOM05D000040 ORTHO05D005142 7.8e-06 54.7 129 31.0
CSS0008411 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D000759 7.8e-06 54.7 118 32.2
AUR62001655 Chenopodium quinoa HOM05D000040 ORTHO05D010772 7.8e-06 54.7 117 35.0
Dinv08640 Davidia involucrata HOM05D000040 ORTHO05D001305 7.8e-06 54.7 121 32.2
PGR044G0080 Punica granatum HOM05D000040 ORTHO05D010772 7.8e-06 54.7 114 33.3
PGR083G1697 Punica granatum HOM05D000040 ORTHO05D002507 7.8e-06 54.7 128 28.9


User provided reference genes

Program Settings