Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5359 Fragaria x ananassa HOM05D002875 ORTHO05D045638 1.2e-123 446.4 219 100.0
FvH4_6g53640 Fragaria vesca HOM05D002875 ORTHO05D045638 1.5e-81 306.6 219 74.4
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 1.5e-36 157.1 105 80.0
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.7e-36 155.2 105 78.1
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.3e-35 154.1 105 77.1
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.8e-35 152.1 105 76.2
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 1.0e-24 117.9 108 62.0
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.2e-22 110.9 111 56.8
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 1.6e-22 110.5 111 55.9
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 2.1e-22 110.2 109 57.8
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 5.7e-20 102.1 109 55.0
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 2.8e-19 99.8 111 55.0
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 2.8e-19 99.8 109 51.4
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 4.8e-19 99.0 104 56.7
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 7.0e-18 95.1 108 52.8
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 2.0e-17 93.6 100 53.0
Cpa.g.sc171.14 Carica papaya HOM05D002875 ORTHO05D003215 4.5e-17 92.4 111 53.2
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 4.5e-17 92.4 100 54.0
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 5.9e-17 92.0 107 49.5
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 2.2e-16 90.1 107 49.5
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 2.9e-16 89.7 101 49.5
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 6.5e-16 88.6 106 50.0
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.5e-15 87.4 108 46.3
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.5e-15 87.4 108 46.3
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 7.2e-15 85.1 114 44.7
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 9.5e-15 84.7 105 51.4
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 9.5e-15 84.7 107 52.3
MBI07_g16948_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 3.6e-14 82.8 97 51.5
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 3.0e-13 79.7 91 49.5
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 5.2e-13 79.0 105 43.8
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 5.2e-13 79.0 108 50.0
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 8.8e-13 78.2 101 48.5
Duzib187G1197 Durio zibethinus HOM05D002875 ORTHO05D003215 1.2e-12 77.8 94 47.9
GSVIVG01033091001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.2e-12 77.8 90 50.0
CSS0041276 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 7.5e-12 75.1 108 48.1
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 2.2e-11 73.6 105 41.9
vmacro18347 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 2.4e-10 70.1 99 47.5
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 4.1e-10 69.3 105 41.9
PSO478G3098 Papaver somniferum HOM05D002875 ORTHO05D003215 4.1e-10 69.3 96 45.8
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 4.1e-10 69.3 108 42.6
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 1.6e-09 67.4 109 39.4
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 3.5e-09 66.2 106 42.5
PSO017G7193 Papaver somniferum HOM05D002875 ORTHO05D003215 7.8e-09 65.1 103 41.7
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 5.0e-08 62.4 106 42.5
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 1.9e-07 60.5 106 39.6
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.3e-07 59.7 99 43.4
arahy.Tifrunner.gnm1.ann1.2000FW Arachis hypogaea HOM05D002875 ORTHO05D003215 1.6e-06 57.4 91 40.7
SMO343G0006 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 8.0e-06 55.1 100 38.0


User provided reference genes

Program Settings